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bertha: Project Skeleton for Scientific Software
Science depends heavily on reliable and easy-to-use software packages, such as mathematical libraries or data analysis tools. Developing such packages requires a lot of effort,... -
cgmanalysis: An R package for descriptive analysis of continuous glucose moni...
Continuous glucose monitoring (CGM) is an essential part of diabetes care. Real-time CGM data are beneficial to patients for daily glucose management, and aggregate summary... -
iPad-Assisted Measurements of Duration Estimation in Psychiatric Patients and...
Handheld devices with touchscreen controls have become widespread in the general population. In this study, we examined the duration estimates (explicit timing) made by patients... -
Image-Based Single Cell Profiling: High-Throughput Processing of Mother Machi...
Background Microfluidic lab-on-chip technology combined with live-cell imaging has enabled the observation of single cells in their spatio-temporal context. The mother machine... -
Diving-flight aerodynamics of a peregrine falcon (Falco peregrinus)
This study investigates the aerodynamics of the falcon Falco peregrinus while diving. During a dive peregrines can reach velocities of more than 320 km h−1. Unfortunately, in... -
Singularity: Scientific containers for mobility of compute
Here we present Singularity, software developed to bring containers and reproducibility to scientific computing. Using Singularity containers, developers can work in... -
Ultra close-range digital photogrammetry in skeletal anthropology: A systemat...
Background: Ultra close-range digital photogrammetry (UCR-DP) is emerging as a robust technique for 3D model generation and represents a convenient and low-cost solution for... -
Ten quick tips for using a Raspberry Pi
Much of biology (and, indeed, all of science) is becoming increasingly computational. We tend to think of this in regards to algorithmic approaches and software tools, as well... -
dLagM: An R package for distributed lag models and ARDL bounds testing
: In this article, we introduce the R package dLagM for the implementation of distributed lag models and autoregressive distributed lag (ARDL) bounds testing to explore the... -
A Smartphone Ecological Momentary Assessment/Intervention "App" for Collectin...
We have designed a flexible ecological momentary assessment/intervention smartphone (EMA/EMI) "app". We examine the utility of this app for collecting real-time data, and... -
Visualizing the Topical Structure of the Medical Sciences: A Self-Organizing ...
Background We implement a high-resolution visualization of the medical knowledge domain using the self-organizing map (SOM) method, based on a corpus of over two million... -
ODM Data Analysis—A tool for the automatic validation, monitoring and generat...
Introduction A required step for presenting results of clinical studies is the declaration of participants demographic and baseline characteristics as claimed by the FDAAA... -
Ranking of Business Process Simulation Software Tools with DEX/QQ Hierarchica...
The omnipresent need for optimisation requires constant improvements of companies’ business processes (BPs). Minimising the risk of inappropriate BP being implemented is usually... -
A quick guide to software licensing for the scientist-programmer.
Computing is ubiquitous in every domain of scientific research. Software is the means by which scientists harness the power of computers, and much scientific computing relies on... -
The Effects of FreeSurfer Version, Workstation Type, and Macintosh Operating ...
FreeSurfer is a popular software package to measure cortical thickness and volume of neuroanatomical structures. However, little if any is known about measurement reliability... -
Ten Simple Rules for a successful remote postdoc.
Author summary Postdocs are a critical transition for early-career researchers. This transient period, between finishing a PhD and finding a permanent position, is when... -
Retailer Stackelberg game in a supply chain with pricing and service decision...
: This paper studies the Retailer Stackelberg game in a supply chain consisting of two manufacturers and one retailer where they compete simultaneously under three factors... -
The feasibility of using citizens to segment anatomy from medical images: Acc...
: The development of automatic methods for segmenting anatomy from medical images is an important goal for many medical and healthcare research areas. Datasets that can be used... -
StructuRly: A novel shiny app to produce comprehensive, detailed and interact...
Population genetics focuses on the analysis of genetic differences within and between-group of individuals and the inference of the populations’ structure. These analyses are... -
Designing a course model for distance-based online bioinformatics training in...
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