120 items found

Types: software Tags: Computational Biology

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  • software

    Data and code to reproduce all analyses described in the paper "NicheNet: Mod...

    Here you can find a directory containing the data and code to reproduce all analyses described in the NicheNet paper (https://www.nature.com/articles/s41592-019-0667-5). ...
  • software

    Model_Sci_Cycling2018

    Source for computing ACd from experimental data.   Materials for Science Cycling 2018.
  • software

    Singularity 2.5.2 - Linux application and environment containers for science

    Containers are proving to be an extremely valuable technology for science; Singularity focuses container approaches, workflows, and methods to create portable environments...
  • software

    Jeu #Réseauxsociaux

    Depuis 2015, le SCD de l’Université de Guyane est engagé dans un renouvellement de sa pédagogie : des séquences de jeux sont...
  • software

    Ycm 0.9.0

    YCM 0.9.0 (2017-07-23) Release Notes Changes made since YCM 0.8 include the following. Modules Generic Modules InstallBasicPackageFiles: Added INCLUDE_CONTENT argument,...
  • software

    Maps of the Iberian Peninsula – comparison Xi, Omega recension

    Ptolemy's catalogue of localities contains a list of places with their coordinates that enables to draw maps of the Iberian Peninsula. Ptolemy's text came down to us in...
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    Singularity Registry

    Singularity Registry is a non-centralized free and Open Source infrastructure to facilitate management and sharing of institutional or personal containers.
  • software

    bigSCale2

    Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data.
  • software

    Modelling of the percolation process

    This application allows modelling percolation lattice in order to approximate the mean number of clusters, implemented with several different algorithms.
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    The deal.II tutorial step-70: Massively parallel non-matching grid simulation...

    In this tutorial we consider a mixing problem for laminar flows. For rotating impellers, the use of Arbitrary Lagrangian Eulerian formulations (in which the fluid domain is...
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    impetuous-gfa

    Group Factor Analysis Code Decomposes a set of expressions into a group expression. The expression regulation can be studied via an ANOVA that relates it to the observables in...
  • software

    Aerodynamics Code Used In Wind Energy Science Paper "Dynamic Inflow Effects I...

    This small MATLAB code has been used to generate the plots in the Wind Energy Science paper "Dynamic inflow effects in measurements and high-fidelity...
  • software

    ogs5py v1.0.3

    Purpose ogs5py is A python-API for the OpenGeoSys 5 scientific modeling package. Installation You can install the latest version with the following command: pip install...
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    METCAP Model

    Second release Model code: Malaria Elimination Transmission and Costing in the Asia-Pacific This repository hosts all the files required to run the multi-species dynamic...
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    Poly-(3-hexylthiophene) Model and Code for Molecular Dynamic Simulations

    Here we present files necessary for simulating our united-atom poly-(3-hexylthiophene) model in molecular dynamics. The input file "P3HT_Blends.py" acts a wrapper...
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    ptrgn-commit-msg

    The codes for manuscript "Generating Commit Messages from Diffs using Pointer-generator Network". The detail information is in the file "README.md".
  • software

    mainlabwsu/TripalMapViewer: Version 7.x-1.0

    Tripal MapViewer is a graphical tool for viewing and comparing genetic maps. It includes dynamically scrollable maps, correspondence matrices, dot plots, links to details about...
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    Alfo5123/Variational-Sparse-Coding: First Release of Submission for ICLR Repr...

    Reproducing the paper "Variational Sparse Coding" as part of the ICLR Reproducibility Challenge 2019
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    Gauging Reaction Effectiveness for the ENvironmental Sustainability of Chemis...

    The Gauging Reaction Effectiveness for the ENvironmental Sustainability of Chemistries with a multi-Objective Process Evaluator (GREENSCOPE) tool allows for quantifying process...
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    Matlab code and simulated data for paper ""Distributed Zeroth Order Optimizat...

    This is a Matlab code and simulated matlab data for paper “Distributed Zeroth Order Optimization Over Random Networks: A Kiefer-Wolfowitz Stochastic Approximation...