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PathoPhenoDB: a database of pathogen-phenotype associations
PathoPhenoDB is a database containing pathogen-to-phenotype associations mined from the scientific literature. PathoPhenoDB relies on manual curation of pathogen-disease... -
dedup_wf_001--678de25d4a66913eeaf6f1bd36b33ffe
Additional file 1. Representative standard curve and amplification plot from each let-7 family member RT-qPCR. Standard curve and amplification plot from (A) let-7a, (B) let-7b,... -
Additional file 4: of STAT3 exacerbates survival of cancer stem-like tumorsph...
Figure S3. Higher levels of PDGFA are associated with overall survival in patients with CRC in the database PROGgeneV2. (TIF 226Â kb) -
Mouse data
Counts of adults worms and miracidea of 3 different lines (susceptible, resistant and mixed resistant-susceptible) inside the mouse host exposed to three different treatments:... -
dedup_wf_001--3970c1434984399555d1741bfecd7067
Underlying data for the paper Nickschick, T., Flechsig, C., Mrlina, J., Oppermann, F., Löbig, F. & Günther, T. (2019): Large-scale electrical resistivity... -
An integrated framework for the identification of potential miRNA-disease ass...
MicroRNAs (miRNAs) play an important role in prevention, diagnosis and treatment of human complex diseases. Predicting potential miRNA-disease associations could provide... -
The Red Queen in the Repository: metadata quality in an ever-changing environ...
This fileset contains a preprint version of the conference paper (.pdf), presentation slides (as .pptx) and the dataset(s) and validation schema(s) for the IDCC 2019 (Melbourne)... -
Study dataset.
Compliance with NPG checklist items: data dictionary available in project space. In version 2, 7 errors from the previous version at database lock (publication date for PMID... -
SD3_HSat3A6ArraySizeEstimates
SD3_HSat3A6ArraySizeEstimates.txt: This file lists the 396 male samples for whom we estimated HSat3A6 array sizes. The first column lists the Sample ID, the second column lists... -
Kras_10-5_132136_filtered.csv
A gzipped csv documenting the tag, read sequence, and associated qualities of all reads matching the majority read length (documented in read lengths csv) of PCR-based 10^-5... -
Supplementary table 1 - gene expression measurements in 0-2 hour Drosophila e...
Gene expression data including ribosome profiling and RNA-seq for 0-2 hour embryos and S2 cells. Source data for Figures 1 and 2, as well as their supplements. Data are... -
Additional file 1: of Expression of miR-296-5p as predictive marker for radio...
Table S1. Raw data of the expression level of 667 human microRNAs in LSCC samples according to the TaqMan Human MicroRNA Array assays. -
Spatial distribution of random velocity inhomogeneities in the southern Aegea...
This dataset contains supplementary files uploaded as part of the above journal article. 5 sub-datasets have been uploaded separately. The first sub-dataset contains the peak... -
termite16S_distribution
The termite16S_distribution.csv is a spreadsheet showing the occurrence of each read in each sample, so that one can easily find out what sequence belongs to what sample. The... -
oophaga-pumilio-r-script
This is an annotated R script that we developed to analyze the data. More details for the analysis are included in our manuscript. -
Demo video of ImAc player
This is a demo video of the open-source accessibility-enabled VR360 player developed within the framework of the EU H2020 ImAc project. Link: http://imac.i2cat.net/player/... -
dedup_wf_001--e88ecfb83ddc59d16e57562e0f34fbb0
Gene expression analysis of transgenic mouse models. Using previously published gene expression data from breast tumors of transgenic mouse models [17], we found genes with... -
MOESM2 of Paclitaxel-activated astrocytes produce mechanical allodynia in mic...
Additional file 2: Figure S2. Cytokine array indicates potential regulation of chemokines in astrocytes after paclitaxel exposure. A, Illustration of the cytokine array with 40... -
MOESM2 of Normal transcription of cellulolytic enzyme genes relies on the bal...
Additional file 2: Figure S2. Saturation analysis of the depth of sequencing data. X-axis showed the number of clean reads, whose extreme value was the current volume of...
