26 items found

Organisations: RISIS2OpenData Tags: 110309 Infectious Diseases 69999 Biological Sciences not elsewhere classified Computational Biology Groups: figshare ZENODO Types: software

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  • software

    Data and code to reproduce all analyses described in the paper "NicheNet: Mod...

    Here you can find a directory containing the data and code to reproduce all analyses described in the NicheNet paper (https://www.nature.com/articles/s41592-019-0667-5). ...
  • software

    Singularity 2.5.2 - Linux application and environment containers for science

    Containers are proving to be an extremely valuable technology for science; Singularity focuses container approaches, workflows, and methods to create portable environments...
  • software

    bigSCale2

    Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data.
  • software

    Modelling of the percolation process

    This application allows modelling percolation lattice in order to approximate the mean number of clusters, implemented with several different algorithms.
  • software

    METCAP Model

    Second release Model code: Malaria Elimination Transmission and Costing in the Asia-Pacific This repository hosts all the files required to run the multi-species dynamic...
  • software

    Alfo5123/Variational-Sparse-Coding: First Release of Submission for ICLR Repr...

    Reproducing the paper "Variational Sparse Coding" as part of the ICLR Reproducibility Challenge 2019
  • software

    Computational files for publication "Destabilizing evolutionary and eco-evolu...

    Maple, Matlab, and R computational files for all analysis in "Destabilizing evolutionary and eco-evolutionary feedbacks drive eco-evo cycles in empirical systems" by...
  • software

    Hypermap

    HHypermap (Harvard Hypermap) Registry is an application that manages OWS, Esri REST, and other types of map service harvesting, and maintains uptime statistics for services and...
  • software

    Colebrook Equation

    MATLAB code to compute the friction factor in pipes for given values of the Reynolds number (Re) and the relative roughness coefficient (epsilon).
  • software

    MATLAB scripts for processing the dataset "Full RREA Dataset" (DOI: 10.5281/z...

    Set of MATLAB scripts used for the Article : "Evaluation of Monte Carlo tools for high energy atmospheric physics II: relativistic runaway electron avalanches" by D....
  • software

    Psearch

    IDL routines for Period search with hybrid algorithm. IDL routines for period finding with multiband data that are sparsely sampled. Hybridizes Lomb-Scargle and Lafler-Kinman...
  • software

    flavourcodev1

    code used in Physical Constraints on a Class of Two-Higgs Doublet Models with FCNC at tree level doi:10.1007/JHEP07(2014)078 documentation...
  • software

    emgr - Empirical Gramian Framework (2.0)

    emgr - EMpirical GRamian framework for model reduction of (nonlinear) input-output systems. More information at: https://gramian.de
  • software

    Dataset for "Lattice-Geometry Effects in Garnet Solid Electrolytes: A Lattice...

    This repository contains lattice-gas Monte Carlo simulation data and supporting code for the paper "Lattice-Geometry Effects in Garnet Solid Electrolytes: A Lattice-Gas Monte...
  • software

    Backtesting Marginal Expected Shortfall and Related Systemic Risk Measures

    These Matlab codes compute the unconditional coverage (UC) and independence (IND) backtesting tests for the systemic risk measures of the article “Backtesting Marginal...
  • software

    Nonlinear Froude-Krylov Matlab demonstration toolbox

    This toolbox and attached document purport to describe in detail the mathematical framework for a computationally efficient computation of nonlinear Froude-Krylov forces...
  • software

    Implementing A Vegetation Optimality Model Of Root Dynamics (Vom-Root) Into N...

    The program was based on the Noah land surface model with multi-parameterization options (Noah-MP LSM) (Niu et al., 2011, Journal of Geophysical Research: Atmospheres, 116(D12),...
  • software

    CMAQv5.0.2

    The Community Multiscale Air Quality (CMAQ) model is an active open-source development project of the U.S. EPA that consists of a suite of programs for conducting air...
  • software

    sgsaenger/vipster v1.18b

    VIsual Periodic STructure EditoR Visualization and editing framework for atomistic simulations. For more information, please visit the Homepage.
  • software

    GICA supported region-based feature selection technique for fMRI data.

    G-ICA supported region-based feature selection technique for fMRI data. By: Indranath Chattterjee Department of computer science, University of Delhi, Delhi-110007, E-mail:...