NOTES describing the pipeline steps used to analyze the ABYSS data.

Includes alignments used in BUCKy and output files for analyses with two different alpha values (1, INFINITY).

Overall description of files/project with additional information on code used, SRA accessions, etc.

FASTA format alignments for 151 protein-coding using three assembly methods: consensus, ambiguity (iupac), and allele phasing. Alleles for each individual are annotated as _h1...

Top level file defining taxon sets used in analyses (e.g. ABYSS and TRINITY, with and without sawflies.

Zip archive containing raw contig assemblies (fasta format) for all samples used in this study.

Location, commit (i.e., snapshot), and URL information for computer code used as part of this manuscript. Placed into Dryad in lieu of committing code under CC0.

For a description of the contents of "RawReads_OxalisHybSeq.gz" please see "RawReads_OxalisHybSeq.doc"

Data used to create Supplementary Figure 7.