Mitochondrial (COI) alignment of Parasemia plantains used in the paper "Temporal relationship between genetic and warning signal variation in the aposematic wood tiger moth...

File list and explanations

This file contains all of the trimmed and aligned DNA sequence data that were analyzed for this paper, and the maximum likelihood trees and the ML bootstrap trees. It is...

log file from *BEAST analysis

These data were collected using ddRADseq (Peterson et al. 2012) and sequenced on a single lane of an Illumina HiSeq 2500, UC Riverside. They are already demultiplexed by...

Structure input file for Bartholomea annulata ddRADseq data for intraspecific genetic clustering analyses

Cognettia H3 run2 t file from MrBayes analysis

A nexus (.nxs, .nex) file for use in parsimony and maximum likelihood analyses

The sequence data for phylogenetic reconstruction and genetic analysis

Appendix_2

Cognettia COI parts file from MrBayes analysis

Cognettia ITS run2 p file from MrBayes analysis

STRUCTURE file for sNMF analysis and GENODIVE. Filtered using min. depth = 10; missing data = 30%

Zip file containing input files from Structurama, Gaussian clustering, BPP, and spedeSTEM. Also contains nexus files for each of 21 loci.

analyses

Cognettia 16S nexus file for MrBayes analysis

Cognettia COI nexus file for MrBayes analysis

Supplementary data files associated with all analyses.

Environmental data sampled from specimens across the Ctenophorus maculatus complex. Data were sourced from databases as listed in the published manuscript. Email author for...

Description of individual and population codes used in the different analyses and genomic datasets.