150 items found

Tags: phylogenetics

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  • dataset

    r37980778c78--45ec1c08d739e098f30e2c7d6a7b83de

    (1) Fish specimen collected at Nouméa fish market or obtained through colleagues, (*) new sequences, (b) BOLD accession number, (v) sequence corresponds to voucher indicated in...
  • dataset

    Table_3_Li_2008

    This file contains all of the input and output files for table 3 in the paper. Including Li et al's alignment file, and partitioning files for all of the different schemes in...
  • dataset

    Dataset composition, marker size and information.

    Dataset composition, marker size and information.
  • dataset

    m5_species_15

    SNP matrix file for species level analyses (maximum 5 mismatches allowed for hstacks processing and including a minimum number of 15 species).
  • dataset

    SUMOHeratoPHASED

    DNA sequence data for the gene SUMO-1 activating enzyme (sae-1) for multiple individuals for multiple races of Heliconius erato. The data is derived from direct sequencing,...
  • dataset

    dedup_wf_001--f373ece417eca00c781c19c82e86f4c9

    Mesquite file containing phylogenetic trees and character matrix.
  • dataset

    m5_species_20

    SNP matrix file for species level analyses (maximum 5 mismatches allowed for hstacks processing and including a minimum number of 20 species).
  • dataset

    dedup_wf_001--7962aa59b2b6b1bb515840fbadd30749

    A nexus (.nxs, .nex) file for use in parsimony and maximum likelihood analyses
  • dataset

    dedup_wf_001--361aaeb091b7aa4071efa58ad7893fb1

    Zip file with all data in raw form.
  • dataset

    Davies et al 2013

    Davies et al 2013
  • dataset

    dedup_wf_001--36b578ffcd604411d5ea1c964678af8b

    Lemmon-etal2012_Phylogenetics_BEST_Amniote_treeDist
  • dataset

    dedup_wf_001--17101651191b3914f576254df3ec4a21

    Untrimmed alignments (fasta-format) of phylogenetic analyses of ploeotids: 1) All taxa, including Entosiphon, 2) excluding Entosiphon
  • dataset

    suppl-data

    contains the alignments of all the 15 datasets under examination in this study
  • dataset

    Appendix 4 Anemones-user-results

    Online Appendix 4. Sea anemones user scores. For each crowd member, we report the number of scores they provided and the number that were correct. The “Estimate” column is...
  • dataset

    Tayassu_pecari_KY987556_SeqData_Filtered_Collapsed.fastq

    FASTQ file containing filtered, de-mulitplexed, and collapsed HiSeq (Illumina) sequencing reads corresponding to the Tayassu pecari enriched genomic library. See main...
  • dataset

    Lemmon-etal2012_Phylogenetics_BEST_Tetrapod

    Lemmon-etal2012_Phylogenetics_BEST_Tetrapod
  • dataset

    Cymbid GB and vouchers MASTER

    Table of voucher specimens and GenBank numbers for Cymbidieae analysis.
  • dataset

    dedup_wf_001--ceecc80c52b204d1873dce254dce2d5d

    R data file containing all objects used or generated as part of this research
  • dataset

    angiosperm-rps11

    Subset of data obtained under Supplementary Figure 3 from: http://www.nature.com/nature/journal/v424/n6945/suppinfo/nature01743.h...
  • dataset

    Linearized F<sub>ST</sub> distances between Mauritius and the different South...

    Linearized FST distances between Mauritius and the different South Asian sub-regions (MAU  =  Mauritius; PWI  =  Pakistan and West India; SWI  =  Southwest India; NI  =  North...