Additional file 6: Table S5. Details of stress-responsive modules, including member id, TE superfamily and TF family classification, membership value, kIM value and p-values...

TEs with putative promoter activity: contains the list of genomic locations for TEs with putative promoter activity in breast cancer (XLSX 19 kb)

List of all Alu primers used. The Microsoft Excel file contains all primer sequences that were used in this study. (XLSX 10Â kb)

Truseq2-PE.fa Illumina adapters used for Trimmomatic trimming. (CSV 566 bytes)

Background As Short Interspersed Elements (SINEs), human-specific Alu elements can be used for population genetic studies. Very recent inserts are polymorphic within and between...

Background RNA-directed DNA methylation (RdDM) is a plant-specific epigenetic process that relies on the RNA polymerase IV (Pol IV) for the production of 24 nucleotide small...

Analysis of the genome transcribed fraction at level of individual growth conditions. The tables summarize the increase in the fraction of genome transcribed (at least two...

Information about LTR-retrotransposon sequences included in the study. (XLS 9823 kb)

Additional file 1. Compiled list of differentially methylated regions in senescent vs. active HSPCs, including 51 hypomethylated and 10 hypermethylated regions.

List of all STR-typing results for the prehistoric individuals. The Microsoft Excel file contains four sheets with all STR-typing results for all prehistoric individuals...

Additional file 3. Raw read counts of the 163 C. elegans analyzed TE. Table containing the raw read counts measured with our pipeline. 1st column contains the names of the 163...