Fasta file containing transcriptome assembly described in Plachetzki et al, 2014

Trimmed RNAseq for Sorghum_9_reverse_paired

Trimmed RNAseq for Sorghum_10_reverse_paired

Additional file 3: Table S1. List of DEG between WT ST and CT. Table S2. List of DEG between KO ST and CT. Table S3. List of DEG between KO ST and WT ST.

Analysis report. A.html file that details all the analysis included herein, including additional figures referred to in the manuscript as well as some further analyses. (HTML...

Table S3. Exhaustive and top-20 lists of up- and down-regulated genes in ipsilateral vs. contralateral isthmus in post-partum lactating (L), non-lactating (NL) cows and heifers...

Trimmed RNAseq for Sorghum_6_reverse_paired

R scripts, R data files, and CSV files with raw data for counts, meta data, parasite data,

Additional file 2. Differential gene expression analysis data.

Total_cardenolide_and_sporeload_data

Trimmed RNAseq for Sorghum_7_reverse_paired

Trimmed RNAseq for Sorghum_3_reverse_paired

Non-default parameters used for bioinformatics tools in this study.

Trimmed RNAseq for Sorghum_2_reverse_paired

Data S2. This data file contains all original data from the enrichment analyses. (XLSX 17 kb)

Survival of flies expressing PntP1 in gut / fat body on 8x or 1x sugar. event: 1 = death, 0 = censored.

Trimmed RNAseq for Sorghum_5_reverse_paired

All necessary raw data and code (raw sequences deposited on Corral)

The lifecycle of Rickettsia rickettsii includes infection of both mammalian and arthropod hosts, with each environment presenting distinct challenges to survival. As such, these...

Trimmed RNAseq for Sorghum_1_reverse_paired