102 items found

Tags: Population Genetics

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  • dataset

    STRUCTURE Data File for western Caribbean A. spinosa populations

    This is the project file for the STRUCTURE analyses covering the western Caribbean A. spinosa populations. The .spj file containing the run parameters are contained in a...
  • dataset

    CoNe_IBD500_OutputFiles

    CoNe Ne estimation output files for IBD scenarios with true Ne = 500. See the same readme for other input/output files for naming conventions.
  • dataset

    ParamFiles_ConversionAndAnalysisScripts

    See the Readme files contained within each subfolder. These are the input files used for nemo simulations (Migration and IBD raw simulation files were >80GB in size when...
  • dataset

    dedup_wf_001--2f4ed80b1609181053daf7deb267af5e

    Structure input file. The four populations correspond to the "Group" column in the file Individuals_info.txt
  • dataset

    dedup_wf_001--ea5b407b78bf232867397e32698a7313

    This compressed directory contains the source code for the allele frequency model described in the publication. Please contact the Zach Gompert (zgompert@uwyo.edu) to inquire...
  • dataset

    Sample description.

    BDI-II: Beck Depression Inventory II [38]. STAI-T: trait scale of the State-Trait-Anxiety-Inventory [39]. LEC: Life Events Checklist [40]. Test for differences between groups:...
  • dataset

    13-0270_Clade C_ITS2

    Nexus file of ITS2 and partial 5.8S sequence of closely related Symbiodinium from the Atlantic and Pacific Oceans investigated during this research.
  • dataset

    dedup_wf_001--6c340ea41d049061dc491371fefe02bc

    File includes inputs and outputs of the MKprf tests (Bustamante et al. 2002).
  • dataset

    Life History

    Lik Simelum talks about his life history and career in education in Vanuatu, before and after independence.
  • dataset

    Tiger shark primers and probes

    QPCR primers, probes and products for tiger shark assays
  • dataset

    dedup_wf_001--074305a1f7d94e18938757302bfadc9b

    Simulation data from the analytical results (using Mathematica) as described in the 'Supporting Information 4'. ReadMe files are contained within the .zip archive.
  • dataset

    Data3_Matlab

    Part 3 of sample data for the Matlab codes
  • dataset

    Barents_Cfit_Input

    Input file for Cfit software. Includes geographic distances for populations along the Barents-Atlantic continuum (see paper) as well as allele counts for each populations.
  • dataset

    Bourret_env_and_pca_factors

    Environmental data used in the principal component analysis and 10 pca factors values obtained and used in the redundancy analysis.
  • dataset

    WB_DP_ped

    ped file with WB and DP individuals
  • dataset

    CoNe_Mig50_OutputFiles

    CoNe Ne estimation output files for Migration scenarios with true Ne = 50. See the same readme for other input/output files for naming conventions.
  • dataset

    2nd fitness assay

    contains fitness data for all lines from the second assay block
  • dataset

    dedup_wf_001--3e358ac21498a43b0d8ce52169bf2044

    Allele frequencies calculated from UNEAK exact counts (mnC=1, minCov=20 and MAF=0.01) and used for principal component analysis (PCA) of Globodera rostochiensis populations from...
  • dataset

    Clutch sizes of all females and breeding seasons

    Clutch sizes (no. of eggs) per female and breeding season are listed. Age of the female is coded as 1 (one year old) or 2 (two or more years old).
  • dataset

    TransplantData

    Data used in Aster model and life history analysis. Includes survival, reproduction status and fruit production within each of three years of the experiment at all sites and for...