21 items found

Tags: Polygenic Traits

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  • dataset

    SNP data - chromosome X

    Genotypes of X chromosome SNPs used in the analysis.
  • dataset

    Demographic estimation data - s9649

    A Matlab file containing data related to demographic parameter estimation by means of Approximate Bayesian Computation.
  • dataset

    SNP data - autosomes

    Genotypes of autosomal SNPs used in the analysis.
  • dataset

    Bayenv2 matlab export script - chromosome X

    A script to export the output of Bayenv2 into a Matlab file (X chromosome).
  • dataset

    Pairwise FST estimates for autosomal SNPs

    A Matlab file containing 3663890 autosomal SNPs, their pairwise FST estimates, and P-values for each SNP derived from coalescent simulations.
  • dataset

    Demographic estimation data - simulated BFs autosomes

    A Matlab file containing Bayes factors calculated on simulated data from the demographic estimation analysis by means of Approximate Bayesian Computation. Contains autosomal SNPs.
  • dataset

    Demographic estimation data - simulated FST autosomes

    A Matlab file containing FST estimated on simulated data from the demographic estimation analysis by means of Approximate Bayesian Computation. Contains autosomal SNPs.
  • dataset

    ABC rejection data - X chromosome

    A Matlab file containing the Approximate Bayesian Computation rejection matrix (X chromosome).
  • dataset

    Bayenv2 intermediate file - raw BFs

    An intermediate Matlab file containing raw Bayes factors from Bayenv2.
  • dataset

    Bayenv2 environment file

    Standardised environmental variables in file format used for the Bayenv2 analysis.
  • dataset

    Power analysis - simulations with sel. coeff. of 0.05

    A Matlab file containing data related to the power analysis. Simulations of the evolution of a polygenic trait with the multilocus selection coefficient set at 0.1 (de Vladar...
  • dataset

    Exclude populations given in popids

    A Matlab script to exclude the unwanted populations.
  • dataset

    dedup_wf_001--6325010a9ab57efc5dfdeab918e81019

    A script to export the output of Bayenv2 into a Matlab file (autosomes).
  • dataset

    Demographic estimation data - simulated BFs chromosome X

    A Matlab file containing Bayes factors calculated on simulated data from the demographic estimation analysis by means of Approximate Bayesian Computation. Contains X chromosome...
  • dataset

    Bayenv2 matrix batch script

    Bayenv2 matrix batch script, outputs bf.mat file.
  • dataset

    Estimate pairwise FST script

    A script to estimate the population pairwise FST. Inputs genotypes as a Matlab file and exports FST values as another Matlab file.
  • dataset

    Demographic estimation data - s8148

    A Matlab file containing data related to demographic parameter estimation by means of Approximate Bayesian Computation.
  • dataset

    Pairwise FST estimates for the X chromosome SNPs

    A Matlab file containing 867049 X chromosome SNPs, their pairwise FST estimates, and P-values for each SNP derived from coalescent simulations.
  • dataset

    dedup_wf_001--36e553453ee21a77b526be278a586897

    A Matlab file containing data related to the power analysis. Simulations of the evolution of a polygenic trait with the multilocus selection coefficient set at 0.1 (de Vladar...
  • dataset

    dedup_wf_001--31746964f8d3e61f124ce0b80ce0f876

    A Matlab file with summarized data from demographic estimation analysis by means of Approximate Bayesian Computation (chromosome X).