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Selection experiment data
This file contains adult survival data and juvenile population counts during the course of the selection experiment described in the associated publication. The proportion of... -
dedup_wf_001--0d70ba401028555fe4c68840718be5fd
Standard input file for BLAST2GO. This file can be loaded directly into .jnlp executable file downloaded from BLAST2GO website. Includes BLASTX results against NCBI’s... -
Information for BAM files on NCBI SRA
BAM files for 117 wolves, separated into genic and neutral regions. See paper text for details on alignment and mapping pipeline. -
Female headless body images of Drosophila melanogaster_DGRP (RAL-799)
Female headless body images of Drosophila melanogaster_DGRP (RAL-799) -
dedup_wf_001--417836f8e8784abda81d93cfec196e64
Genotypes for European lines of A. thaliana (Chromosome 1) genotyped at a density of one SNP per kb. These data are used in our tutorial example 2 and supplementary file 2. Data... -
D. melanogaster median Fst and latitude
D. melanogaster Fst values for pair-wise population comparisons and the latitude of each population. The analysis of isolation by distance used the median Fst (median.Fst) and... -
TLR1LB_All_genotypes2015
This is the output file with Phase results for TLR1LB in Berthelot's pipits. This is a fasta file but should be opened using a text editor such as Notepad -
Information on SNPs identified from transcriptome data (vcf file)
SNPs identified from transcriptome alignment files in variant call format. SNPs were identified using GATK. Parameters and filters for calling SNPs are listed in header.... -
Alternative splice events identified in Peromyscus leucopus transcriptome
This FASTA file contains two sequences for each alternative splicing sequence, labeled as upper and lower splice, that was identified in the Peromyscus leucopus transcriptome. -
Plink .bim file used for Exploratory Behaviour analysis
Contains marker information for 459,502 autosomal SNPs -
dedup_wf_001--8d743f1a02019879290fd72655c50f82
cmr data used to measure and visualize selection on wing length -
longdataYEAR1
Data for the first year's experiment. Under Rearing_environment, exp is the experimental stream and lab the hatchery. -
input_Bvalues
B-value map that was used as input file for SweepFinder2. Original data from: McVicker G, Gordon D, Davis C, Green P (2009) Widespread genomic signatures of natural selection in... -
dedup_wf_001--c011a0939e4d2fdf68e11db5a61e0227
Phenotype data (amount of acetates) for all parental, F1 and backcross females that were phenotyped
