BAM files for Mouse3 obtained with FindMyVirus

mEPICmanifest. (XLS 5446 kb)

BAM files for Mouse4 obtained with FindMyVirus

BAM files for Control1 obtained with FindMyVirus

Raw and analysed data (including statistical results) for all electrophysiological recordings, light measurements and pupillographic data used to generate Figs. 1, 2, 3, 4, 5,...

Pig_EPIC. (XLS 2701 kb)

EPICprobes. (TXT 54191 kb)

Additional file 1. Fetal eye measurements.

Lamberton et al. 2017 IDoP Raw mouse and worm data from experimental infections. (XLSX 242 KB)

Table S2. Differentially regulated genes in +/+ DMM vs SHAM. Table S3. Differentially regulated genes in c/c DMM vs SHAM. Table S4. Differentially regulated genes in +/+ DMM vs...

BAM files for Mouse1 obtained with FindMyVirus

Additional file 6 Supplementary File 5 | GTF annotation file with all curated mouse OR transcript models from the Ensembl-HAVANA annotation.

Part 2 of raw fastq data

Additional file 4 Supplementary File 3 | List of curated human and mouse split OR genes.

Additional file 5: Video 5. Observer behaviour when viewing cagemate mice with MK-801-induced hyperactivity for 4 min. It is a 4 × speed movie.

Chimpanzee_EPIC. (XLS 6473 kb)

This file contains the following excel files: Sample list, Expression levels, Ranked list of differential expression

Proteogenomics tutorial input datasets

Additional file 3: Video 3. Observer behaviour when viewing cagemate mice subjected to a 1-s foot shock every 2 s for 4 min. It is a 4 × speed movie.

Additional file 6: Video 6. Consumption of chocolate chips in the presence of no foot-shocked cagemate mice for 4 min. It is a 4 × speed movie.