59 items found

Types: software Tags: Immunology Molecular Biology

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  • software

    r37980778c78--f59d1b86592cf6e8ff692c7d58b2a6e7

    For the Wellcome open research paper, there's a requirement to have an archived version of the code at the time of publication and to get a DOI for it with Zenodo. This release...
  • software

    Software used in 'Discontinuous Galerkin discretization for two-equation turb...

    This record collates DOIs for the software components used in 'Discontinuous Galerkin discretization for two-equation turbulence closure model'. The Firedrake components and...
  • software

    r37980778c78--798dd20d6c1419e77c22118f9f64660e

    R package associated with the following research paper : Fadili, M., Renaud, JP., Bock, J. et al. Annals of Forest Science (2019) 76: 30....
  • software

    A Jupyter Notebook to Describe URLs from Journal documents

    A notebook with a script that harvest a Journal articles using OAI-PHM, download articles files and convert to text, cralws referenced URLs checking its HTTP reponse codes....
  • software

    r37980778c78--98126034b3f07da4ac4b76e920480a7f

    This repository containes singularity containers used to impute 6 months GOSe in the production database of CENTER-TBI.
  • software

    labordynamicsinstitute/ldi-replication-dataprep: LDI Replication Lab Data Pre...

    These programs prepare and clean the raw data from the LDI Replication Lab. The output is manually curated on Zenodo, and used for downstream analysis.
  • software

    Supplemental Material for Astrophysical Journal paper "Improved Coupling of H...

    A Jupyter notebook containing several derivations of equations in the paper "Improved Coupling of Hydrodynamics and Nuclear Reactions via Spectral Deferred Corrections"
  • software

    bigSCale2

    Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data.
  • software

    r37980778c78--a2fc1054489a79693e137eda44d9e12d

    Natural products (NPs), often also referred to as secondary metabolites, are small molecules synthesized by living organisms. Natural products are of interest due to their...
  • software

    r37980778c78--8c66a3b29d1bfbf10dfe02cd92f444f5

    This archive contains the Snakemake workflow used to produce the results presented in the Bioconda publication, along with all required input data. See...
  • software

    Snakemake Workflow Archive: Bioconda Paper

    This archive contains the Snakemake workflow used to produce the results presented in the Bioconda publication, along with all required input data. See...
  • software

    CLARIAH/grlc 1.1

    grlc is a lightweight server that takes SPARQL queries curated in GitHub repositories, and translates them to Linked Data Web APIs. This enables universal access to Linked Data....
  • software

    r37980778c78--f5062bf6ac5079c39371b42fa4dcaf47

    GenerateAG.m is a short MATLAB script that calculates a restricted generalized inverse AG using input data from an atmospheric photochemistry mechanism. The inverse problem...
  • software

    r37980778c78--806dd10f4ed0cd48a923c40b41ba37b8

    Cobb-Dug L-opt 2.mw  --- нахождение оптимального плана, если точки плана внутренние optim_design.mw --- проверка оптимальности плана, если точки плана --- углы единичного...
  • software

    r37980778c78--905748fea9521b1bf8cb506b658c4d2b

    This file contains all the scripts and formated data that were used for the ms entitled "The quiescent X, the replicative Y and the Autosomes" by Achaz et al. The biorxiv...
  • software

    Archive for synthetic model SIRE OUU implementation

    The python scripts and jupyter notebook of the synthetic model OUU SIRE nitrate loading implementation described in "A non-intrusive approach for efficient stochastic...
  • software

    UTokyo-mip/mipplot: First Beta release

    Public repository for mipplot tool.
  • software

    r37980778c78--a47aecc47606ed5050f2d1d2d1ece66a

    A MatLab code producing a model estimate of energy and efficiency in Extended Emission produced in black hole spin-down against a thick torus. It uses numerical integration of...
  • software

    ChristianLanger/eml-profile: EBV-EML-Schema

    Version v0.5 of the EBV Metadata Profile XSD schema. Version v0.5 is focused on species-level EBVs, especially on the species populations EBV class, and maybe equally...
  • software

    R scripts for "Noise model estimation with application to gene expression"

    R - scripts for the paper: Zhornikova P., Golyandina N., Spirov A. "Noise model estimation with application to gene expression"