List of evaluated potentially driver mutations and their detailed description. (XLSX 22Â kb)

Sample identification and summary of data. (XLSX 15 kb)

Tables S4-S9. Significant correlations for each type group at each sample collection time. (XLSX 27 kb)

This is an MS Excel file. This file includes 19 supplementary tables. (XLSX 3645 kb)

This ZIP file contains the FASTQ files of the paired-end reads (R1: reads 1; R2: reads 2) produced for each individual in duplicate using the MiSeq platform (Run 2). The 746...

This ZIP file contains the FASTQ files of the paired-end reads (R1: reads 1; R2: reads 2) produced for each individual in duplicate using the MiSeq platform (Run 2). The 746...

This is an OTU-sample table of the OTUs found in the blank sample (negative control) and removed from further analysis. The representative sequences and the BLAST matches are...

This XLSX file contains the run names, the sample IDs, the sample types, the PCR IDs, the PCR replicate numbers, the localities, the rodent species and the fastq file names for...

High impact mutation types included in the analysis. (XLSX 9 kb)

Paired-end Illumina seqeuncing output fastq file with forward reads.

This ZIP file contains the FASTQ files of the paired-end reads (R1: reads 1; R2: reads 2) produced for each individual in duplicate or triplicate using the MiSeq platform (Run...

This is an MS Excel file. This file includes 28 supplementary tables. (XLSX 43750 kb)

Supplementary Tables. This is an MS Excel file with multiple sheets. This file includes 8 supplementary tables. (XLS 5603 kb)

Table S4. Information of differentially expressed miRNAs in A-B and A-R compare group. (XLSX 19 kb)

Background Cytoplasmic male sterility (CMS) in flowering plants is usually caused by incompatibility between mitochondrial and nuclear genomes, and can be restored by nuclear...

Background Recent results demonstrated that either non-coding or coding genes generate phased secondary small interfering RNAs (phasiRNAs) guided by specific miRNAs. Till now,...

Background Cold is a major abiotic stress limiting the production of tropical and subtropical crops in new production areas. Sugarcane (Saccharum spp.) originates from the...

Background As modern humans, we spend the majority of our time in indoor environments. Consequently, environmental exposure to microorganisms has important implications for...

Background Human T cell leukemia virus type 1 (HTLV-1) causes adult T cell leukemia (ATL) in a proportion of infected individuals after a long latency period. Development of ATL...

AbstractBackgroundCavefish populations belonging to the Mexican tetra species Astyanax mexicanus are outstanding models to study the tempo and mode of adaptation to a radical...