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Additional file 6: of Bioinformatics Resource Manager: a systems biology web ...
Zebrafish miRNA list. List of differentially expressed miRNA in zebrafish after treatment with BAP. (TXT 1305 kb) -
Fast and accurate large multiple sequence alignments with a root-to-leaf regr...
This dataset contains a GitHub repository containing all the data, analysis, Nextflow workflows and Jupyter notebooks to replicate the manuscript titled "Fast and... -
Additional file 2: of A standardized framework for representation of ancestry...
Table S1. GWAS Catalog countries of recruitment for which no ancestry information was provided. (XLSX 77 kb) -
dedup_wf_001--9f772dfe77735acace90d9a804b688d4
Table S3. Specific examples to illustrate the application of the framework to the GWAS Catalog. (XLSX 70 kb) -
Mitochondrial genome annotation Amphiprion frenatus
Mitochondrial genome annotation for Amphiprion frenatus, in csv format. MitoAnnotator and MitoFish were used to obtain the mitochondrial genome annotation. For more information,... -
Additional file 5: of A standardized framework for representation of ancestry...
Table S4. HapMap Project and 1000 Genomes Project populations with assigned ancestry category. (XLSX 27 kb) -
R_scripts
R scripts used for multivariate genomic analysis, mtDNA analysis, morphology, dadi data preparation, dadi model to demographic value conversion, and all figures. -
dedup_wf_001--53327e9d9369d004524b8a3fac888877
Accessions of Cucumis melo genotyped in this study. Abbreviation in the origin field refer to different Provinces within the Apulia Region (BA: Bari; BAT: Barletta-Andria-Trani;... -
Genome-wide recruitment profiling of transcription factor Crz1 in response to...
Exposure of the budding Saccharomyces cerevisiae to an alkaline environment produces a robust transcriptional response involving hundreds of genes. Part of this response is... -
TableS2
Association mapping results of the top 100 SNPs for each trait including P-values, negative log transformed P-values, FDR corrections, physical positions and ranking information. -
Processed_Data
Fig.1 The He number density for equilibrium He bubble at 300K. The green and red dots correspond to the unsaturated and saturated state, respectively. Fig.2 The pressure of... -
Isolated Iliac Cryptococcosis in an Immunocompetent Patient
Cryptococcal osteomyelitis is an infrequent infection which is usually associated with disseminated cryptococcosis or underlying immunocompromised conditions. Here we described... -
Additional file 2: of Pairing pedagogical and genomic advances to prepare adv...
Table S2. Shows the response options for assessment of satisfaction with the course. (XLSX 8 kb) -
Model Selection
(A) Blue bars: the percentage of periodic solutions in 40,000 simulations for some level of total control protein in the range 0–2500 copies/nucleus. Red bars: the percentage... -
r37980778c78--c359922dd1024d0d6b1ab33945587e37
Filtered VCF containing approximately 13 million SNPs. This file contains data for 20 individuals (c = coastal, u = upland). See extended data table 1 for sample information. -
Expression Data
These files contain expression data, both in its pre-processed form and the actual data we used to generate the results. We've also included the scripts used to process the... -
Regional heterogeneity in response of airway epithelial cells to cigarette smoke
Abstract Background Cigarette smoke (CS) exposure causes an abnormal inflammatory response, which can result in chronic obstructive pulmonary disease (COPD). Previous studies...