62 items found

Tags: Genetics Natural Selection and Contemporary Evolution

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  • dataset

    dedup_wf_001--0d70ba401028555fe4c68840718be5fd

    Standard input file for BLAST2GO. This file can be loaded directly into .jnlp executable file downloaded from BLAST2GO website. Includes BLASTX results against NCBI’s...
  • dataset

    Information for BAM files on NCBI SRA

    BAM files for 117 wolves, separated into genic and neutral regions. See paper text for details on alignment and mapping pipeline.
  • dataset

    Female headless body images of Drosophila melanogaster_DGRP (RAL-799)

    Female headless body images of Drosophila melanogaster_DGRP (RAL-799)
  • dataset

    Environmental_data_MEC-12-0462

    Environmental data for each site
  • dataset

    dedup_wf_001--417836f8e8784abda81d93cfec196e64

    Genotypes for European lines of A. thaliana (Chromosome 1) genotyped at a density of one SNP per kb. These data are used in our tutorial example 2 and supplementary file 2. Data...
  • dataset

    D. melanogaster median Fst and latitude

    D. melanogaster Fst values for pair-wise population comparisons and the latitude of each population. The analysis of isolation by distance used the median Fst (median.Fst) and...
  • dataset

    environmental_data_polygenicRDA

    Environmental data for the polygenic RDA analysis
  • dataset

    Information on SNPs identified from transcriptome data (vcf file)

    SNPs identified from transcriptome alignment files in variant call format. SNPs were identified using GATK. Parameters and filters for calling SNPs are listed in header....
  • dataset

    Alternative splice events identified in Peromyscus leucopus transcriptome

    This FASTA file contains two sequences for each alternative splicing sequence, labeled as upper and lower splice, that was identified in the Peromyscus leucopus transcriptome.
  • dataset

    Phenotypes_OlsonEtAl2012

    Phenotypes_OlsonEtAl2012
  • dataset

    selection data

    Data file containing measurements of selection gradients and differentials
  • dataset

    dedup_wf_001--8d743f1a02019879290fd72655c50f82

    cmr data used to measure and visualize selection on wing length
  • dataset

    RefSNP_annotation_Dryad_KellerOlson

    RefSNP_annotation_Dryad_KellerOlson
  • dataset

    dedup_wf_001--c011a0939e4d2fdf68e11db5a61e0227

    Phenotype data (amount of acetates) for all parental, F1 and backcross females that were phenotyped
  • dataset

    Female headless body images of Drosophila melanogaster_DGRP (RAL-786)

    Female headless body images of Drosophila melanogaster_DGRP (RAL-786)
  • dataset

    Origin and number of frogs used for mtDNA analysis

    Populations, geographic coordinates and sample sizes of samples used for mtDNA analysis. The column “Microsat No.*” refers to the numbering of populations in Table S1 (new),...
  • dataset

    26snp_reference data for analysis of assignment

    Reference data (individual genetic data (26 SNP's for each ind) for the North sea and coastal component). SNP's are described in paper.The other file contains inds that was...
  • dataset

    WythamCNV

    A list of CNVs in the unfiltered Wytham Woods dataset
  • dataset

    SNP data - chromosome X

    Genotypes of X chromosome SNPs used in the analysis.
  • dataset

    SNP data - autosomes

    Genotypes of autosomal SNPs used in the analysis.