List of the benchmark problems used in the comparisons.

MIDER toolbox. This compressed file contains the MIDER toolbox, which is implemented in Matlab. It includes all the datasets used in this article, the source code of the MIDER...

Table S23. List of mouse genes displaying significant association with refractive error in both UK Biobank and CREAM cohorts, and whose expression correlates with baseline...

What proportion of genes with intense and selective expression in specific tissues, cells, or systems are still almost completely uncharacterized with respect to biological...

NMI Benchmark by three community detection algorithms comparing with Yang's labeled community structure.

Table S1. Baseline refractive errors in Collaborative Cross mice measured at P40 (diopters). Table S2. Form-deprivation myopia in Collaborative Cross mice (deprived eye versus...

Average running time (in seconds) over 10 runs by three community detection algorithms.

The pairs were chosen to illustrate different aspects of practical use of interaction distance. Uniform binning of the phenotype was used to generate the table. An extended...

Number of communities by three community detection algorithms and Yang's labeled community structure.

Table S19. List of mouse genes displaying significant association with refractive error in CREAM cohort and whose expression correlates with baseline refractive error in mice...

The underlined markers are QTLs with significant effect on a corresponding phenotype: the bold markers are the strongest QTLs (p-value<∼0.0001), while the other underlined...

Symbols U and O stand for uniform and optimal binning respectively.

Table S12. List of human myopia QTLs and candidate genes located within 200 kb of the lead SNP (or within critical region). (XLSX 28 kb)

Modularity by three community detection algorithms.

Centrality indices of the example sketched in Fig. 4.

Summary of network data sets.

Table S16. List of human myopia QTLs showing overlap with genes exhibiting correlation with either refractive error or susceptibility to myopia in mice. (XLSX 16 kb)

Table S13. List of genes localized within human myopia QTLs and whose expression correlates with baseline refractive error in mice. Table S14. List of genes localized within...