Zebrafish miRNA list. List of differentially expressed miRNA in zebrafish after treatment with BAP. (TXT 1305 kb)

This dataset contains a GitHub repository containing all the data, analysis, Nextflow workflows and Jupyter notebooks to replicate the manuscript titled "Fast and...

M237I_ACS sample/ forward reads/ part 2 (please join with ACAGTG1_part1.fq for a complete sample). This sample corresponds to ACS mutagenesis performed on the p53 core domain...

R-codes for analyses. This zipped file includes a total of 23 R-code files. Results can be obtained by executing scripts in the order of the serial numbers XX in the filename...

Spreadsheet file with full details of, a) differential expression analysis results for GSE26049, b) list of probes used in the signature, and c) full results from QUADrATiC....

R script for methylation percentage analysis (R 4 kb)

First lecture of Bioinformatics course.

Citations used by stats_knitr_.md to build the references list.

Mining results of kidney Yang-Tonifying Chinese Herbal Medicines. (XLS 222 kb)

Additional file 1. Differentially expressed genes (DEG), overall summary of the bioinformatics analysis using the Dynamic Impact Approach (DIA), and individual categories and...

Data from questionnaires (LibreOffice Calc spreadsheet). For details of contents, see the â Notesâ worksheet. (ODS 82 kb)

M237I_ACS sample/ reverse reads/ part 1(please join with ACAGTG2_part2.fq for a complete sample). This sample corresponds to ACS mutagenesis performed on the p53 core domain...

Program for a bioinformatics workshop organized through the Central African Biodiversity (CAB) Alliance and held at the Université des Sciences et Techniques de Masuku (USTM) in...

M237I sample/ reverse reads/ part 2 (please join with TGACCA2_part1.fq for a complete sample). Represents the unprocessed p53 core domain that contains the cancer mutation M237I...

Helper R functions used by stats_knitr_.md to run the statistics.

All reference datasets Excel file. (XLS 21262 kb)

Complete set of our pipeline of Perl programs to characterize human haplotypes and Denisovan diplotypes is presented in this file. All the output files which contain information...

Read count file for the mouse ionization/p53 dataset. This file was used in our analysis. (CSV 1513 kb)

Results of DESeq analysis for the N16961 to N16961R pairwise comparison. (XLSX 190 kb)

Experimentally validated target interaction of miR-15/107 family (TarBase v8.0). (XLSX 98 kb)