314 items found

Types: software Groups: ZENODO Tags: Biochemistry

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  • software

    The pax data processor v6.8.0

    The Processor for Analyzing XENON (PAX) is used for digital signal processing and event reconstruction of the XENON1T raw data. 
  • software

    Software used in 'Discontinuous Galerkin discretization for two-equation turb...

    This record collates DOIs for the software components used in 'Discontinuous Galerkin discretization for two-equation turbulence closure model'. The Firedrake components and...
  • software

    Capytaine v1.0.1

    Main changes in version 1.0.1: Paper for the Journal of Open Source Software Fix OpenMP parallelization Minor improvements of the documentation See docs/changelog.rst for...
  • software

    Robot Swarm Collision Rate

    This is MATLAB code for very simple simulations that detect the rate at which collisions occur in groups of robots working together. The main parameters of interest are the...
  • software

    A Jupyter Notebook to Describe URLs from Journal documents

    A notebook with a script that harvest a Journal articles using OAI-PHM, download articles files and convert to text, cralws referenced URLs checking its HTTP reponse codes....
  • software

    The Turing Way: A Handbook for Reproducible Data Science

    Reproducible research is necessary to ensure that scientific work can be trusted. Funders and publishers are beginning to require that publications include access to the...
  • software

    Hertzsprung/Atmostests: Suite Of Idealised Atmospheric Tests

    This release is that used to produce the results for the article, A multidimensional method-of-lines transport scheme for atmospheric flows over steep terrain using arbitrary...
  • software

    OpenMC 0.6.1

    New Features Coarse mesh finite difference (CMFD) acceleration no longer requires PETSc Statepoint file numbering is now zero-padded Python scripts now compatible with...
  • software

    UPOsHam: A Python package for computing unstable periodic orbits in two degr...

    This Python package is a collection of three methods for computing unstable periodic orbits in Hamiltonian systems that model a diverse array of problems in physical sciences...
  • software

    SAMRI — Small Animal Magnetic Resonance Imaging

    SAMRI (Small Animal Magnetic Resonance Imaging) - pronounced "Sam-rye" - provides fMRI preprocessing, metadata parsing, and data analysis functions and pipelines....
  • software

    UMCUGenetics/IAP: v2.0.0

    New sge module, containing qsub templates which use the new time and mem variables. New karyotypeplot. Seperate markdup settings from mapping settings. Send done email...
  • software

    Replication files for "It's Raining Men! Hallelujah? The Long-Run Consequence...

    This document presents data and programs used to produce empirical evidence presented in the article and in the Online Appendix. Codes for this paper were run using Stata. The...
  • software

    MitoA analysis tool for Linux

    The MitoA analyser is an easy-to-use GUI-based morphological quantification tool that enables biologists to analyse and compare different samples of segmented mitochondria...
  • software

    Shogun: Shogun 4.1.0 - Tajinohi No Agatamori

    This is a new feature and cleanup release. Features: Added GEMPLP for approximate inference to the structured output framework [Jiaolong Xu]. Effeciency improvements of the...
  • software

    QPage - Free Project For Creating Academic Homepage Without Any Code

    QPage or QuickPage is a Free Project For Creating Academic Homepage Without Any Code Run setup (for the first use wait to create folders) You can download samples and...
  • software

    iLCSoft/ConformalTracking: v01-10

    v01-10 2019-10-08 Remi Ete (PR#55) ConformalTracking processor: Use streamlog macros instead of raw calls 2019-09-09 Andre Sailer (PR#54) Add Parameter TooManyTracks to...
  • software

    Unofficial Geant4 10.04.03 Windows Installer (full functionality) Visual Stud...

    Unofficial Windows installer for Geant4 10.04.03 (see also the official one https://geant4.web.cern.ch/node/1765). It is self-consistent, i.e. it does not require...
  • software

    Adversarial Algorithms In Tensorflow

    Bug fix for DeepFool binary classifier case Add batch mode for DeepFool where the algorithm runs until the max epoch is reached. Add batch mode example
  • software

    labordynamicsinstitute/ldi-replication-dataprep: LDI Replication Lab Data Pre...

    These programs prepare and clean the raw data from the LDI Replication Lab. The output is manually curated on Zenodo, and used for downstream analysis.
  • software

    Software used in 'Testing'

    This records collates DOIs for the software components used in 'Testing'. The Firedrake components and dependencies used were: COFFEE (A Compiler for Fast Expression...