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COI ZOTUs
Quality-trimmed, adapter-trimmed, dereplicated, chimera-filtered and denoised sequences amplified from odonate faecal DNA COI region. -
Sample metadata
Microbiome sample metadata. "SampleID" = unique identifier for a sequenced 16S rDNA amplicon pool corresponding to a single sample. "Name" = more descriptive unique sample name.... -
dedup_wf_001--72be117d125ca66d91fe9a30aed6d974
SRA ID codes of HMP samples. A Table listing the Sequence Read Archive accession codes of the Human Metaproteome Project samples used in the study. (XLS 30Â kb) -
16S ZOTUs
Quality-trimmed, adapter-trimmed, dereplicated, chimera-filtered and denoised sequences amplified from odonate faecal DNA COI region. -
Additional file 5: of Individual signatures and environmental factors shape s...
Alpha diversity values and statistics. A) Alpha diversity values for all samples. B) Differences on alpha diversity values among groups regarding different variables. C) Alpha... -
dedup_wf_001--ada5ecba0e4b8095ecd427bcd35ce9d5
The project contains the fastq files (in a gzipped format) from simulated RNA-seq data for 12 paired-ended samples (i.e., biological replicates); all reads are 101 base pairs... -
Sequence data
Over the years, several methods have been proposed for the computational PPI prediction with different performance evaluation strategies. While attempting to benchmark... -
Fat and vitamin intakes during pregnancy have stronger relations with a pro-i...
Background Although diet is known to have a major modulatory influence on gut microbiota, knowledge of the specific roles of particular vitamins, minerals, and other nutrients... -
Microbes and associated soluble and volatile chemicals on periodically wet ho...
Background Microorganisms influence the chemical milieu of their environment, and chemical metabolites can affect ecological processes. In built environments, where people spend... -
Microbiota of the indoor environment: a meta-analysis
Background As modern humans, we spend the majority of our time in indoor environments. Consequently, environmental exposure to microorganisms has important implications for... -
Improved taxonomic assignment of human intestinal 16S rRNA sequences by a ded...
Background Current sequencing technology enables taxonomic profiling of microbial ecosystems at high resolution and depth by using the 16S rRNA gene as a phylogenetic marker.... -
Singularity image for nf-core/ampliseq and nf-core/rnaseq pipeline
Singularity image for the "nf-core/ampliseq" pipeline, version 1.0 Singularity image for the "nf-core/rnaseq" pipeline, version 1.2 Build from a... -
Additional file 4: of VOLARE: visual analysis of disease-associated microbiom...
Underlying data, case study 2. (CSV 25 kb) -
16S and 18S FASTA files
16S and 18S amplicon sequencing files for microbial network analysis. Files are in FASTA format. One 18S and one 16S file is provided for each of the 18 samples in the study.... -
Additional file 1: of Comparing microbiotas in the upper aerodigestive and lo...
Dataset S1. Sample processing data for all samples. (XLSX 18Â kb)
