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On DNA numerical representations for genomic similarity computation
Genomic signal processing (GSP) refers to the use of signal processing for the analysis of genomic data. GSP methods require the transformation or mapping of the genomic data to... -
Sequence information
This Excel file provides descriptive information about the sequences included in the sequence file (All individual clone sequences.fas). For each clone sequence, the descriptive... -
Primers and probes.
Table 3 indicates primers and probes designed for the 16S rRNA RT-qPCR, the primers described by Fyfe et al., and a re-designed hydrolysis probe used for the amplification,... -
Study dataset.
Compliance with NPG checklist items: data dictionary available in project space. In version 2, 7 errors from the previous version at database lock (publication date for PMID... -
SD3_HSat3A6ArraySizeEstimates
SD3_HSat3A6ArraySizeEstimates.txt: This file lists the 396 male samples for whom we estimated HSat3A6 array sizes. The first column lists the Sample ID, the second column lists... -
Kras_10-5_132136_filtered.csv
A gzipped csv documenting the tag, read sequence, and associated qualities of all reads matching the majority read length (documented in read lengths csv) of PCR-based 10^-5... -
Testing of 105 DEC strains from a reference collection by the routine method ...
Testing of 105 DEC strains from a reference collection by the routine method and by the Cliffhanger method. -
Additional file 2: of Association between intake of red and processed meat an...
Figure S2. Sensitivity analysis between processed meat intake and the risk of heart failure. (TIF 35 kb) -
Crystallographic data collection and refinement statistics.
*Values in parentheses are for highest-resolution shell.aRmerge = Σh Σi|Ii(h)−<I(h)>/|Σh Σi Ii(h), where I is the observed intensity and <I> is the average intensity... -
mtDNA alignment
Mitochondrial (COI) alignment of Parasemia plantains used in the paper "Temporal relationship between genetic and warning signal variation in the aposematic wood tiger moth... -
SUMOHeratoPHASED
DNA sequence data for the gene SUMO-1 activating enzyme (sae-1) for multiple individuals for multiple races of Heliconius erato. The data is derived from direct sequencing,... -
Use of Plasmid pVMG to Make Transcriptional ß-Glucuronidase Reporter Gene Fus...
Abstract Background The soil bacterium Sinorhizobium meliloti and its allies are important nitrogen-fixing bacterial symbionts that cause N2-fixing nodules on the roots of... -
MOESM1 of Donor variability may mask dimethyl fumarateâ s effects on nuclear...
Additional file 1. All raw data collected and used in analyses for this manuscript, organized by figure number. -
r37980778c78--e1922667f8b9d798003f7e7c9e178073
(A) The bacterial cell wall component LPS upregulates BPIFA1 expression through the JNK/c-Jun signaling pathway, followed by AP-1 activation. (B) IL-13, a TH2-skewed cytokine,... -
termite16S_distribution
The termite16S_distribution.csv is a spreadsheet showing the occurrence of each read in each sample, so that one can easily find out what sequence belongs to what sample. The... -
Additional file 3: Figure S3. of Thrombin-induced, TNFR-dependent miR-181c do...
Schematic overview of thrombin’s effects upon miR-181c and MLL1 in human microglia. Thrombin (via PAR4) induces TNF-α secretion from human microglia [21]. Thrombin-induced TNF-α... -
Molecular epidemiology and whole genome sequencing analysis of clinical <i>My...
BackgroundBovine tuberculosis (bTB) caused by Mycobacterium bovis is a re-emerging problem in both livestock and humans. The association of some M. bovis strains with... -
r37980778c78--c7f3b311582265e8ff0cfede5910b435
Peroxidase activity of OxdAs using guaiacol as a substrate.
