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Additional file 4: Table S4. of The contribution of Alu exons to the human pr...
List of RT-PCR primers. (XLSX 10 kb) -
Additional file 5: of Integration of proteomic and transcriptomic profiles re...
Table S3. Summary of four types of proteomic and mRNA-seq data. (XLSX 1082 kb) -
Additional file 6: of Integration of proteomic and transcriptomic profiles re...
Table S4. Summary of AS-DEGs and their corresponding protein information after 4Â h and 24Â h of salt stress. (XLSX 505 kb) -
Additional file 3: of Multilayered control of exon acquisition permits the em...
Table S2. GO terms results for genes with exonization events. (XLSX 109 kb) -
SNCA targeted gDNA: PacBio raw data
The landscape of SNCA transcripts across synucleinopathies: New insights from long reads sequencing analysis gDNA capture using IDT xGen® Lockdown® Probes and... -
dedup_wf_001--a11a4b6c5454b69e2722befc615043c7
Table S5. GO terms results from GProfiler for exonization events identified depleted in cancer samples. (XLSX 254 kb) -
Additional file 4: of Identification of genome-wide non-canonical spliced reg...
U12-type and U2-type intron sequences used in the study. This file contains U12-type and U2-type 5Ⲡand 3Ⲡsequences and their associated gene information. (XLSX 69 kb) -
Additional file 3: of Integration of proteomic and transcriptomic profiles re...
Table S1. Summary of iTRAQ-based proteomic data. (XLSX 3294 kb) -
Alternative Splicing Changes As Drivers Of Cancer
This dataset contains information on alternative splicing isoform switches as described in the related paper "Alternative splicing changes as drivers of cancer" (pre-print... -
Deoxynivalenol globally affects the selection of 3’ splice sites in human cel...
Deoxynivalenol (DON) is one of the most abundant mycotoxins and has adverse effects on several biological processes, posing risks of protein synthesis-disrupting effects and... -
Additional file 2: of Conserved regulation of RNA processing in somatic cell ...
RNA-Seq sample table. The file contains an XLSX spreadsheet of the RNA-Seq data sets used in this study. For each sample listed are, from left to right, the Sequence Read... -
Additional file 2: of Systematic evaluation of isoform function in literature...
Contains a list of all human and mouse literature we curated for this study, and curatorsâs annotations for each study. (XLSX 187 kb) -
Additional file 6: of Transcriptome characterization of moso bamboo (Phyllost...
Table S6. List of differentially AS events including IR, ES, AltA and AltD. (XLSX 207 kb) -
Additional file 3: of Comparison of RNA-seq and microarray platforms for spli...
Compressed file including the GTF files generated for the matched events. (ZIP 15 kb) -
Additional file 3: of Transcriptome characterization of moso bamboo (Phyllost...
Table S1. Primer list used in this study. (XLSX 20 kb) -
dedup_wf_001--356a581841f244c5bc1747a1300641bb
Statistics reported by RSR for 64 test cases for the Dtt sample. This file contains all supplementary results for 64 test cases for the Dtt sample. (XLSX 79 kb) -
dedup_wf_001--9bee64f14062ade0777f06d527041b5f
This dataset contains information on alternative splicing isoform switches as described in the related paper "Alternative splicing changes as drivers of cancer" (pre-print... -
Additional file 9: of Transcriptome characterization of moso bamboo (Phyllost...
Table S9. List of 42 differentially expressed cis-NATs upon GA treatment. (XLSX 14 kb) -
Additional file 7 of Sequence and structural properties of circular RNAs in t...
List of primers and probes for PCR and TaqMan assay. Excel table with a list of all PCR primers used in this study. A second sheet lists the TaqMan probes. (XLSX 10 kb)