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Fast and accurate large multiple sequence alignments with a root-to-leaf regr...
This dataset contains a GitHub repository containing all the data, analysis, Nextflow workflows and Jupyter notebooks to replicate the manuscript titled "Fast and... -
Bridging the Gap Between Basic Research and Applied Bioinformatics
The talk was given on October 4, 2019, as part of the Seminar Series of the Department of Bioinformatics and Genomics (BIG), College of Computing and Informatics (CCI), the... -
msBiodat analysis tool, big data analysis for high-throughput experiments
Background Mass spectrometry (MS) are a group of a high-throughput techniques used to increase knowledge about biomolecules. They produce a large amount of data which is... -
The Development of Computational Biology in South Africa: Successes Achieved ...
Bioinformatics is now a critical skill in many research and commercial environments as biological data are increasing in both size and complexity. South African researchers... -
MARV: a tool for genome-wide multi-phenotype analysis of rare variants
Background Genome-wide association studies have enabled identification of thousands of loci for hundreds of traits. Yet, for most human traits a substantial part of the... -
Identifying, naming and interoperating data in a Phenotyping platform network...
The EPPN2020 is a research project funded by Horizon 2020 Programme of the EU that will provide European public and private scientific sectors with access to a wide range of... -
Mapping The Sub-Cellular Proteome
In biology, localisation is function. Cells display a complex sub-cellular structure with numerous distinct niches responsible for specific biological processes. Consequently,... -
Biotite 0.5.3 repository
Biotite is a comprehensive computational biology framework in Python for analysis and manipulation of sequence and structure data. -
VMWare Image for the UPM Computational Biology Master's Degree Programme
USER: osboxes PASSWORD: osboxes.org VMWare Image for the UPM Computational Biology Programme - Python, Ruby, R, and Semantic Web tools (RDF libraries and... -
Script for (single thread) alignment-based MLST analysis
This script is a modified version of the script implemented by Leighton Pritchard (https://github.com/widdowquinn/scripts/blob/master/bioinformatics/run_...) for the... -
cleberecht/singa: singa-all release v0.4.0
In this update we are migrating to our own domain singa.bio for packaging. Correspondingly, the maven group and all packages change from "de.bioforscher.singa" to... -
protfasta
protfasta is a simple, robust parser for working with FASTA files. It is pure python and has no external package dependencies other than Python language modules. This DOI... -
Structural Variant Discovery And Genotyping In Next-Generation Sequencing Data
Code, logs, data, and summaries for detection and genotyping of genomic structural variants in the D.melanogaster Sussex LHM hemiclones (and one in-house reference line...
