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Landscape of gene fusions in epithelial cancers: seq and ye shall find
Abstract Enabled by high-throughput sequencing approaches, epithelial cancers across a range of tissue types are seen to harbor gene fusions as integral to their landscape of... -
dedup_wf_001--03bbe3d4eb4587078a3a697b4d898888
Genes with up-regulated expression found in samples derived from cow mammary gland parenchyma infected with coagulase-positive Staphylococci in 3rd or 4th lactations (CoPS-3/4).... -
The Red Queen in the Repository: metadata quality in an ever-changing environ...
This fileset contains a preprint version of the conference paper (.pdf), presentation slides (as .pptx) and the dataset(s) and validation schema(s) for the IDCC 2019 (Melbourne)... -
Study dataset.
Compliance with NPG checklist items: data dictionary available in project space. In version 2, 7 errors from the previous version at database lock (publication date for PMID... -
SD3_HSat3A6ArraySizeEstimates
SD3_HSat3A6ArraySizeEstimates.txt: This file lists the 396 male samples for whom we estimated HSat3A6 array sizes. The first column lists the Sample ID, the second column lists... -
Kras_10-5_132136_filtered.csv
A gzipped csv documenting the tag, read sequence, and associated qualities of all reads matching the majority read length (documented in read lengths csv) of PCR-based 10^-5... -
Additional file 2: of Association between intake of red and processed meat an...
Figure S2. Sensitivity analysis between processed meat intake and the risk of heart failure. (TIF 35 kb) -
Effect of hCMSCs and liraglutide combination in ALI through cAMP/PKAc/β-caten...
Abstract Background ALI/ARDS is the major cause of acute respiratory failure in critically ill patients. As human chorionic villi-derived MSCs (hCMSCs) could attenuate ALI in... -
mtDNA alignment
Mitochondrial (COI) alignment of Parasemia plantains used in the paper "Temporal relationship between genetic and warning signal variation in the aposematic wood tiger moth... -
Supplementary Data: "Challenges In Automated High-Throughput Ab Initio Thermo...
These supplementary data contain input and output files of EMTO density-functional theory (DFT) calculations and IPython/Jupyter notebooks that were used in analyzing the... -
Spatial distribution of random velocity inhomogeneities in the southern Aegea...
This dataset contains supplementary files uploaded as part of the above journal article. 5 sub-datasets have been uploaded separately. The first sub-dataset contains the peak... -
termite16S_distribution
The termite16S_distribution.csv is a spreadsheet showing the occurrence of each read in each sample, so that one can easily find out what sequence belongs to what sample. The... -
Additional file 3: Figure S3. of Thrombin-induced, TNFR-dependent miR-181c do...
Schematic overview of thrombin’s effects upon miR-181c and MLL1 in human microglia. Thrombin (via PAR4) induces TNF-α secretion from human microglia [21]. Thrombin-induced TNF-α... -
CIViCmine
This describes the output files for the CIViCmine project. These files are loaded directly by the CIViCmine viewer. The code for this viewer is available in the CIViCmine Github... -
Detection of cytosine and CpG density in proto-oncogenes and tumor suppressor...
Aberrant methylation is one of the driving forces of cancer genome development. Although the rate of methylation appears massively variable across the genome, it is mainly... -
Available data
Assembled EST-SSR sequences, single-copy gene sequences and 3,126 gene sequences with Ka value, Ks value and Ka/Ks ratio. The files (alignment file,tree file,script file) for... -
survival_data
We measured larval mortality for S. droebachiensis at 3 different temperatures (3, 10 and 21 °C) reared in 4-l culture jars (n = 3). Temperatures in the jars were maintained... -
Additional file 1: of Investigation of methicillin-resistant Staphylococcus a...
Data on clinical samples from humans used for the detection of Staphylococcus aureus and MRSA in Bangladesh. (CSV 7 kb) -
CIViCmine
This describes the output files for the CIViCmine project. These files are loaded directly by the CIViCmine viewer. The code for this viewer is available in the CIViCmine Github...
