freedman_2014_plosgenetics_vcffiles

Included in the tarball are merged vcf files, for individual autosomes, for the 6 canid genomes sequenced for and described in "Genome Sequencing Highlights the Dynamic Early History of Dogs", Freedman et al, PLoS Genetics 2014. Those are: Chinese wolf, Israeli wolf, Croatian wolf, Golden jackal, Dingo and Basenji.These files have been converted to boxer reference genome CanFam 3.1 coordinates (the original paper was in v. 3.0 coordinates). See Freedman et al. 2014 for a detailed description of filters.

Tags
Data and Resources
To access the resources you must log in

This item has no data

Identity

Description: The Identity category includes attributes that support the identification of the resource.

Field Value
PID https://www.doi.org/10.5061/dryad.sk3p7/1
URL https://figshare.com/articles/freedman_2014_plosgenetics_vcffiles/4093623
URL http://dx.doi.org/10.5061/dryad.sk3p7/1
Access Modality

Description: The Access Modality category includes attributes that report the modality of exploitation of the resource.

Field Value
Access Right Open Access
Attribution

Description: Authorships and contributors

Field Value
Author Freedman, Adam H.
Author Gronau, Ilan
Author Schweizer, Rena M.
Author Ortega-Del Vecchyo, Diego
Author Han, Eunjung
Author Silva, Pedro M.
Author Galaverni, Marco
Author Fan, Zhenxin
Author Marx, Peter
Author Lorente-Galdos, Belen
Author Beale, Holly
Author Ramirez, Oscar
Author Hormozdiari, Farhad
Author Alkan, Can
Author Vilà, Carles
Author Squire, Kevin
Author Geffen, Eli
Author Kusak, Josip
Author Boyko, Adam R.
Author Parker, Heidi G.
Author Lee, Clarence
Author Tadigotla, Vasisht
Author Siepel, Adam
Author Bustamante, Carlos D.
Author Harkins, Timothy T.
Author Nelson, Stanley F.
Author Ostrander, Elaine A.
Author Marques-Bonet, Tomas
Author Wayne, Robert K.
Author Novembre, John
Publishing

Description: Attributes about the publishing venue (e.g. journal) and deposit location (e.g. repository)

Field Value
Collected From Datacite; figshare
Hosted By figshare; DRYAD
Publication Date 2016-01-27
Publisher Dryad Digital Repository
Additional Info
Field Value
Language UNKNOWN
Resource Type Dataset
system:type dataset
Management Info
Field Value
Source https://science-innovation-policy.openaire.eu/search/dataset?datasetId=dedup_wf_001::5c41565abdcc3f171e171029997ab0e9
Author jsonws_user
Version None
Last Updated 16 December 2020, 12:15 (CET)
Created 16 December 2020, 12:15 (CET)