NeuroAnatomy Toolbox v1.5.2

nat v1.5.3 This is the current stable release on github. Changes since the last stable release on CRAN (v1.4.10) are detailed below. Changes in version 1.5.3: new function pointsinside to determine if points (e.g. neuron) are inside a closedd surface resample.neuron implemented (no support for interpolating widths or multiple) subtrees dotprops.neuron can resample to a consistent segment length consistent return values for as.seglist and seglengths when all subtrees are returned seglengths can return lengths for each edge as well as the sum for each neurite segment (the default) suppress remote tests if flybrain unreachable zenodo DOI for package Changes in version 1.5.2: add seglengths function for neurons add segmentgraph function to produced a simplified graph representation of neurons with one edge per segment add potential_synapses.dotprops method add as.seglist.neuron method teach plot3d.hxsurf and subset.hxsurf to accept regexes always drop unused vertices in as.mesh3d.hxsurf fix bug in write.neurons when subdir not specified fix colouring of vectors by plot3d.dotprops dev: switch to roxygygen2 v4 Changes in version 1.5.1: add potential_synapses (from nat.as) surfaces: add subset.hxsurf and as.mesh3d Teach read.im3d to read Vaa3d raw format add plot.neuronlist (for 2d plotting) add c.neuronlist function to combine neuronlists add db argument to plot3d.character make WithNodes=FALSE the default for plot3d.neuronlist make asp=1 the default for image.im3d write.cmtkreg warns if versions specified by cmtkreg attribute and argument differ (to avoid writing old registrations as if they were new or vice versa) fix: prune.neuronlist method signature (and therefore dispatch)

Tags
Data and Resources
To access the resources you must log in

This item has no data

Identity

Description: The Identity category includes attributes that support the identification of the resource.

Field Value
PID https://www.doi.org/10.5281/zenodo.10171
PID https://www.doi.org/10.5281/zenodo.10411
URL http://dx.doi.org/10.5281/zenodo.10411
URL https://zenodo.org/record/10411
URL http://dx.doi.org/10.5281/zenodo.10171
URL https://zenodo.org/record/10171
URL https://figshare.com/articles/NeuroAnatomy_Toolbox_v1_5_2/6911939
Access Modality

Description: The Access Modality category includes attributes that report the modality of exploitation of the resource.

Field Value
Access Right Open Source
Attribution

Description: Authorships and contributors

Field Value
Author Jefferis, Gregory
Author Ajdm
Contributor European Commission
Publishing

Description: Attributes about the publishing venue (e.g. journal) and deposit location (e.g. repository)

Field Value
Collected From Zenodo; Datacite; figshare
Hosted By Zenodo; figshare
Publication Date 2014-01-01
Publisher Zenodo
Additional Info
Field Value
Language UNKNOWN
Resource Type Software
keyword neuroscience, neuroanatomy, image processing, R
system:type software
Management Info
Field Value
Source https://science-innovation-policy.openaire.eu/search/software?softwareId=dedup_wf_001::03fdd62f0a6ae787790172b71551e5f1
Author jsonws_user
Last Updated 17 December 2020, 12:28 (CET)
Created 17 December 2020, 12:28 (CET)