155 items found

Types: software Groups: ZENODO Tags: Cell Biology Genetics

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  • software

    mwlodarczak/RespInPeace: Another DOI release

    RespInPeace -- Process and analyse breathing belt (RIP) data.
  • software

    Inovesa/Inovesa: 2016-11

    This feature level is described in the first paper (see https://arxiv.org/abs/1611.05293). It supports everything needed to do simulations of longitudinal phase space. Change...
  • software

    neurostuff/NiMARE: Initial release

    Release Notes This is NiMARE's initial release. NiMARE is still alpha software, so the package may change dramatically from release to release and there may be bugs in the code....
  • software

    gitter-lab/SINGE: Version 0.2.0

    Version 0.3.0 contains optimizations that greatly increase SINGE's speed but can change its output: Switch to single precision for the kernel matrix Set an upper bound...
  • software

    WrightTools

    One of the larger WrightTools releases: Dropped support for Python 3.5 -- Now 3.6+ only (#798) New method: Moment (see #786): Take the Nth moment of a channel along an axis...
  • software

    Software used in 'The scaling and skewness of optimally transported meshes on...

    This records collates DOIs for the software components used in 'The scaling and skewness of optimally transported meshes on the sphere'. The Firedrake components and...
  • software

    Segmentator v1.3.0

    Segmentator is a free and open-source package for multi-dimensional data exploration and segmentation for 3D images. This application is mainly developed and tested using...
  • software

    Poldracklab/Fmriprep: 1.0.12

    Release Notes A long overdue release. This release integrates the great work of @mgxd to provide results in the CIFTI/grayordinates format for surface-based analyses. It also...
  • software

    MorphoLibJ: MorphoLibJ 1.3.0

    MorphoLibJ libraray v1.3.0. New features: Interactive tool for watershed distance transform (2D/3D) Interactive tool for morphological reconstruction using manual markers...
  • software

    ReproZip: 1.0.8

    Behavior changes: No longer default to overwriting trace directories. ReproZip will ask what to do or exit with an error if one of --continue/--overwrite is not provided...
  • software

    ReproZip: 1.0.9

    (reprounzip-vistrails didn't change) Bugfixes: Fix CentOS Docker image versions Remove Fedora Docker images, they don't have tar Do include .pyc files in packages, so...
  • software

    poldracklab/fmriprep: 1.0.4

    Release notes This release fixes minor issues found during Testing Phase 2, and gives a solution to some execution errors derived from Nipype latest changes. CHANGES [FIX] Pin...
  • software

    greenelab/continuous_analysis: Continuous Analysis v1.0

    This release is associated with the in press version of the continuous analysis manuscript.
  • software

    Object Oriented Internet 5.0.2

    SemanticData ModelDesign Export 5.0.2-Alpha This release: API Browser Object Oriented Internet eBook Changes: SemanticData - updated against OPC UA Specification...
  • software

    pybinding v0.9.5: a Python package for tight-binding calculations

    Pybinding is a Python package for numerical tight-binding calculations in solid state physics. The main features include: Declarative model construction - The user just...
  • software

    Freesasa 2.0

    FreeSASA is an open source library and command line tool to calculate the solvent accessible surface areas of protein molecules. The library is as fast and accurate as existing...
  • software

    MultiDOE: sampling technics on MATLAB/OCTAVE - v3.2

    MultiDOE This MATLAB/OCTAVE toolbox regroups many existing tools for generating sample points using many specific DOE techniques: Full factorial sampling Latin Hypercube...
  • software

    The Coq Proof Assistant, version 8.7+beta2.

    Coq 8.7 includes: A large amount of work on cleaning and speeding up the code base, notably the work of Pierre-Marie Pédrot on making the tactic-level system insensitive to...
  • software

    Regularised ADMM reconstruction algorithm for X-ray CT (ADMM-tomo)

    Regularised ADMM-type iterative reconstruction algorithm for X-ray tomographic reconstruction. Software highlights: Tomographic projection data are simulated without the...
  • software

    pBroad and gFit -- Pressure Broadening Global Line Fitting Suite

    Hosted at https://gitlab.com/Eiceman/pbroadgfit Originally these two suites of programs were developed for the paper "Re-evaluation of ortho-para-dependence of...