124 items found

Groups: figshare Tags: Evolutionary Biology Genetics Infectious Diseases Microbiology Molecular Biology

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  • dataset

    Additional file 3: Figure S2. of Population genomics of pearl millet (Pennise...

    Minor allele frequency distribution for Senegalese landraces (A) and global accessions (B). The red lines represent the expected neutral allele frequency distribution. (PPTX 187...
  • dataset

    Additional file 5: Figure S2. of New isolations of the rabies-related Mokola ...

    Bayesian analysis of the coding region of the Phosphoprotein gene (913 bp) applying the general time reversible substitution model with gamma distribution. Laboratory reference...
  • dataset

    Two nucleotide second messengers regulate the production of the Vibrio choler...

    Abstract Background The nucleotide second messengers cAMP and c-di-GMP allow many bacteria, including the human intestinal pathogen Vibrio cholerae, to respond to environmental...
  • dataset

    Additional file 2: of Distinguishing potential bacteria-tumor associations fr...

    This file is a tab-delimited text file of all TCGA read pairs and their corresponding metadata and bacterial taxonomic assignments. Comments are denoted by a #. Abbreviations...
  • dataset

    Additional file 1: of RepeatAnalyzer: a tool for analysing and managing short...

    Â A table including all known A. marginale SSRs. Each SSR includes all names it has been assigned, separated by semicolons, and sources where it has been referenced are cited...
  • dataset

    Additional file 2: Figure S2. of Assessment of the prognostic and predictive ...

    a Frequency histogram of BCI. b Frequency histogram of H:I. c Frequency histogram of MGI. (ZIP 117 kb)
  • dataset

    Simulation parameters.

    MBR = MPW = MCV = 100, MCA = WBA. n ∈ {3, 9, 27}, WBA ∈ [0.1, 2], WPC ∈ [0, 20], WCT = 0.1. ⌈n/2⌉ groups of size 1 and ⌊n/2⌋ of size chosen uniformly at random from [1, ⌊n/2⌋]....
  • dataset

    Additional file 7: Figure S4. of New isolations of the rabies-related Mokola ...

    Bayesian analysis of the coding region of the Glycoprotein gene (1569 bp) applying the general time reversible substitution model with gamma distribution and invariable sites....
  • dataset

    Additional file 7: of Integrated analyses using RNA-Seq data reveal viral gen...

    Summary of de novo transcriptome assembly from the pear mRNA data. (XLSX 7Â kb)
  • dataset

    Additional file 1: Table S1. of Towards a balanced view of the bacterial tree...

    Environmental origin of metagenomic datasets. Shown is the total number of metagenomes for each environment type, the total number of extracted SSU rRNA sequences >â 1200Â...
  • dataset

    Additional file 11: Figure S10. of Adhesive organ regeneration in Macrostomum...

    Regeneration of gland necks after rostrum amputation. Confocal projections and DIC images of regenerating heads after (A) 24, (B) 48, (C) 96, and (D) 240Â h of regeneration....
  • dataset

    Additional file 1: Figure S1. of YPTB3816 of Yersinia pseudotuberculosis stra...

    PCR analysis of Y. psedutuberculosis YPIII wild type (lane 2), and three clonal isolates of the ΔopdA mutant (lanes 3–5) using gene specific primers Yptb3816_for...
  • dataset

    Additional file 6: Figure S3. of RNA sequencing to characterize transcription...

    Histogram presentation of Clusters of orthologous groups (COG) classification. A total of 6111 predicted unigenes were classified in 25 COG categories. (TIF 2126Â kb)
  • dataset

    Flying ticks: anciently evolved associations that constitute a risk of infect...

    Abstract Ticks are important vectors of emerging zoonotic diseases affecting human and animal health worldwide. Ticks are often found on wild birds, which have been long...
  • dataset

    Additional file 2: Table S2. of Derivation of chicken induced pluripotent ste...

    List of differentially expressed genes between BA3NI-I6 and BA3NI-I9-C1 (average of biological triplicates). (XLSX 189 kb)
  • dataset

    Additional file 8: Dataset S4. of No evidence for a bovine mastitis Escherich...

    Phylogroup-enriched OGs (A, B1, B2, or E) with Fisher exact test p-values (and Bonferroni correction) for phylogroup A versus B1 associations and vice versa. Furthermore the...
  • dataset

    Additional file 3: of Molecular typing of Leptospira interrogans serovar Hard...

    Blast analysis for qRT-PCR assay for IS1500, IS1533 and secy. (XLS 100 kb)
  • dataset

    Additional file 2: Figure S1. of Development of ListeriaBase and comparative ...

    tRNA Island Clusters. The 5 tRNA islands and their arrangements as identified in the L. monocytogenes strains. (TIFF 462Â kb)
  • dataset

    Additional file 7: Figure S2. of Variations on a theme: Genomics of sex deter...

    Gene expression of A. burtoni lab strain along the reference chromosomes of the Nile tilapia. Gene expression in male and female gonads of the A. burtoni lab strain along the...
  • dataset

    Complete genome analysis of a novel recombinant isolate of pepper veinal mott...

    Abstract Background Pepper veinal mottle virus (PVMV) was well established in Africa, and also reported infecting pepper (Capsicum annuum L) in Taiwan and India. However, there...