124 items found

Groups: figshare Tags: Evolutionary Biology Genetics Infectious Diseases Microbiology Molecular Biology

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  • publication

    dedup_wf_001--d2d7e81cd21ccfe4af330fa048f89c7e

    Heatmap representation of the expression patterns of the top 50 genes selected by XGBoost across all 602 â normalâ samples taken adjacent to tumors from 17 tumor types. Each...
  • publication

    Additional file 6: Figure S2. of A robust and cost-effective approach to sequ...

    Phylogenetic analysis based on the complete genome coding sequence of Newcastle disease virus isolates studied here and selected closely related sequences from GenBank. Figure...
  • publication

    Pids, Decisions & Open Science For All: What The Scholarly Commons Could ...

    Poster for PIDapalooza 2018 expressing the connection between the Scholarly Commons and the need for practical, workable methods of using PIDs meaningfully in research workflows.
  • publication

    A Unique Multi-Messenger Signal of QCD Axion Dark Matter

    Slides from GW4FP talk to the associated paper http://arxiv.org/abs/arXiv:1905.04686
  • dataset

    Anthocyanins abrogate glutamate-induced AMPK activation, oxidative stress, ne...

    Abstract Background Glutamate-induced excitotoxicity, oxidative damage, and neuroinflammation are believed to play an important role in the development of a number of CNS...
  • dataset

    Additional file 5: Figure S2. of Asymmetric somatic hybridization induces poi...

    Characterization of indels. (A) An insertion (291–764) present in an SR3 unigene has flanking sequence which matches that in its JN177 homolog. (B) A deletion (490–523) present...
  • dataset

    Additional file 2: of Molecular typing of Leptospira interrogans serovar Hard...

    Sequences included in molecular phylogenetic analysis (GenBank access). (XLS 43 kb)
  • dataset

    dedup_wf_001--35aae541e933eb1a588e7fa71e906f1f

    Tables S1 and S2. Gene expression in murine macrophages treated with LPS. Microarray analysis of gene expression in macrophages treated with LPS for 6Â h (Table S1.) and 24Â h...
  • dataset

    Additional file 4: of Integrated analyses using RNA-Seq data reveal viral gen...

    SNVs of ASGV isolate Fuji in ASGV-infected sample. (XLSX 17 kb)
  • dataset

    Additional file 2: Table S3. of DNA barcoding and surveillance sampling strat...

    Uncorrected percentage sequence distances, mean with range shown in parentheses. Intraspecific distances are shown in bold along the diagonal, interspecific distances are shown...
  • dataset

    Additional file 1: Table S1. of Derivation of chicken induced pluripotent ste...

    List of differentially expressed genes between BA3NI-I0 and BA3NI-I6 (average of biological triplicates). (XLSX 57 kb)
  • dataset

    Additional file 5: Table S2. of Low-power photodynamic therapy induces surviv...

    Overview of primer sequences and resulting amplicon sizes (in bp) that were used for the validation of microarray expression levels using qRT-PCR. The primers are listed in the...
  • dataset

    Production of human pro-relaxin H2 in the yeast Pichia pastoris

    Abstract Background Initially known as the reproductive hormone, relaxin was shown to possess other therapeutically useful properties that include extracellular matrix...
  • dataset

    Additional file 2: Table S2. of Production of hemolysin BL by Bacillus cereus...

    Virulence-associated genes included in the comparative genomic analysis of Bacillus cereus group isolates. (XLSX 33 kb)
  • dataset

    MOESM2 of The 1.78-kb insertion in the 3′-untranslated region of RXFP2 does n...

    Additional file 2: Figure S1. Multiple sequence alignment of the region surrounding the insertion in the 3’-UTR of RXFP2. The 506-bp sequence amplified in sheep from horned...
  • dataset

    Additional file 7: Dataset S3. of No evidence for a bovine mastitis Escherich...

    This file includes the pathotype-enriched OGs (MAEC or commensal isolates) with a 70% inclusion and 30% exclusion cutoff and their potential association with phylogroup-enriched...
  • dataset

    Additional file 1: of Molecular typing of Leptospira interrogans serovar Hard...

    Leptospira spp. strains used in MAT and PCR analysis. (XLS 34 kb)
  • dataset

    The transcriptome of Candida albicans mitochondria and the evolution of organ...

    Abstract Background Yeasts show remarkable variation in the organization of their mitochondrial genomes, yet there is little experimental data on organellar gene expression...
  • dataset

    Additional file 4: Figure S1. of New isolations of the rabies-related Mokola ...

    Bayesian analysis of the coding region of the Nucleoprotein gene (1353 bp) of all Mokola virus isolates (Additional file 3: Table S3) applying the general time reversible...
  • dataset

    Additional file 8: Table S4. of Emerging role of mutations in epigenetic regu...

    Details of the 25 missense mutations destroying phosphorylation sites. (XLS 26 kb)