48 items found

Types: software Tags: Immunology Microbiology

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  • software

    Gitter-Lab/Pria_Lifechem: Version 0.1.0

    Virtual screening on PriA-SSB and RMI-FANCM with the LifeChem library. Lock the RDKit version Update analysis Jupyter notebooks to correspond to the de-duplicated...
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    Software used in 'Discontinuous Galerkin discretization for two-equation turb...

    This record collates DOIs for the software components used in 'Discontinuous Galerkin discretization for two-equation turbulence closure model'. The Firedrake components and...
  • software

    Omics Visualizer

    Cytoscape 3 app to import & visualize several data for the same node in a biological network.
  • software

    ReproZip: 1.0.5

    (reprounzip-vagrant didn't change) Bugfixes: Correctly download parameters from server More reliable way of determining X server IP without using /bin/ip Downloads:...
  • software

    Ppr User Study Software

    Software developed for the User Study described in:  Daga, Enrico, Mathieu d'Aquin, and Enrico Motta. "Propagating Data Policies: a User...
  • software

    Supplemental Material for Astrophysical Journal paper "Improved Coupling of H...

    A Jupyter notebook containing several derivations of equations in the paper "Improved Coupling of Hydrodynamics and Nuclear Reactions via Spectral Deferred Corrections"
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    bigSCale2

    Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data.
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    Modelling of the percolation process

    This application allows modelling percolation lattice in order to approximate the mean number of clusters, implemented with several different algorithms.
  • software

    nfrerebeau/khroma v1.1.0

    ADD: FAO Soil Reference Groups colour scheme ADD: scale_*_bright() method for Paul Tol's bright colour scheme ADD: scale_*_vibrant() method for Paul Tol's vibrant...
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    Arcticcritter

    Arcticcritter is a prototype webbased data exploration and retrieval tool build to showcase visualization techniques and to enable user-driver demand analysis for...
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    Inovesa/Inovesa: 2016-11

    This feature level is described in the first paper (see https://arxiv.org/abs/1611.05293). It supports everything needed to do simulations of longitudinal phase space. Change...
  • software

    Code For Bayesian Inference Of Dose-Response Curve Parameters

    This is an archived version of the initial release of dose-response-fitting to co-incide with a Wellcome Open Research article. The latest version can be found at:...
  • software

    Object Oriented Internet 5.0.2

    SemanticData ModelDesign Export 5.0.2-Alpha This release: API Browser Object Oriented Internet eBook Changes: SemanticData - updated against OPC UA Specification...
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    D02K3pi binning scheme

    A package for dividing the phase space of \(D^0 \to K \pi\pi\pi\) decays into bins. Code is provided to evaluate the CF/DCS amplitude models from the LHCb collaboration...
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    Pooch: A friend to fetch your sample data files

    Does your Python package include sample datasets? Are you shipping them with the code? Are they getting too big? Pooch is here to help! It will manage a data registry by...
  • software

    lbusett/MODIStsp: MODIStsp v 1.3.1 Release Notes

    MODIStsp v1.3.1 MODIStsp v1.3.1 was released on 13/02/2017 Major Changes Added functionality for processing of Snow Cover datasets: MOD10A1, MOD10A2, MOD10C1, MOD10C2,...
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    AVR: Abstractly Verifying Reachability

    Accepted artifact for the TACAS 2020 paper - AVR: Abstractly Verifying Reachability -------------------------------------------------------------------------- The artifact...
  • software

    Hoogle Plus

    Hoogle Plus is a program synthesis tool that implements Type-Guided Abstraction Refinement as outlined in the matching paper[1] and presented at the 47th ACM SIGPLAN...
  • software

    Software for paper: Two is better than one: Studying host plant/fungal compat...

    These files represent software I developed as part of the publication: Two is better than one: Studying host plant/fungal compatibility by using a hybrid pathogen. One file is...
  • software

    gap-packages/Semigroups: 3.0.2

    This is an minor release fixing some minor issues in the last release.  The following issues were resolved: Issue 330 InversesOfSemigroupElement some times returned an...