144 items found

Types: software Tags: Developmental Biology Genetics

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  • software

    Cassiopeia

    An all-inclusive Python framework for the Riot Games League of Legends API. We focus on making the data easy and fun to work with, while providing all the tools necessary to...
  • software

    Arcticcritter

    Arcticcritter is a prototype webbased data exploration and retrieval tool build to showcase visualization techniques and to enable user-driver demand analysis for...
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    Csu 1Dvar -- Gmi Warm Rain Retrieval

    Supporting information for publication on a variational retrieval of warm rain from the GMI sensor aboard the GPM satellite. Enclosed are two output data files as well as...
  • software

    SI for "A Computational Study of Structural and Excitonic Properties of Chlor...

    files in chapter * are stored in chapter_* folders note for CTubeGen software in chapter_5 folder A software I developed for generating arbitrary chlorosomal tubes,...
  • software

    Code for Quantum Simulation of Attosecond Physics

    Code for Quantum Simulation of Attosecond Physics Author: Md Masudur Rahman This collection contains the code implementation and individual figure files for the report...
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    gitter-lab/SINGE: Version 0.2.0

    Version 0.3.0 contains optimizations that greatly increase SINGE's speed but can change its output: Switch to single precision for the kernel matrix Set an upper bound...
  • software

    Software used in 'The scaling and skewness of optimally transported meshes on...

    This records collates DOIs for the software components used in 'The scaling and skewness of optimally transported meshes on the sphere'. The Firedrake components and...
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    Segmentator v1.3.0

    Segmentator is a free and open-source package for multi-dimensional data exploration and segmentation for 3D images. This application is mainly developed and tested using...
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    PathfinderTURB for CHM15K ceilometers

    The PathfinderTURB algorithm is coded in MATLAB and requires a certain number of toolboxes. The version of PathfinderTURB available here is for any type of CHM15K, if someone...
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    TractSeg pretrained weights - endings_segmentation

    Pretrained weights for TractSeg for output type "endings_segmentation".
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    VACUO - Vascular Analysis of Combined Ultrasound and Optoacoustic Data

    This code performs automatic segmentation of volumetric optoacoustic data into skull and brain vessels based on co-registered ultrasound data. The segmented vascular networks...
  • software

    Role of the quasi-particles in an electric circuit with Josephson junctions (...

    This the codes and data used to produce results of the article Role of the quasi-particles in an electric circuit with Josephson junctions. It is a new algorithm to from...
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    ReproZip: 1.0.9

    (reprounzip-vistrails didn't change) Bugfixes: Fix CentOS Docker image versions Remove Fedora Docker images, they don't have tar Do include .pyc files in packages, so...
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    KNIME Python wrapper

    Abstract Python wrapper KNIME node and helpers. Used for development of KNIME nodes calling Python scripts. Changed In tests call PythonWrapperTestUtils.init() instead of...
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    phenoCDM: Continuous Development Models for Incremental Time-Series Analysis

    Using the Bayesian state-space approach, we developed a continuous development model to quantify dynamic incremental changes in the response variable. While the model was...
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    Mathematica notebook for the calculation of spectra and Qs of self-similar bi...

    The Mathematica notebook can calculate frequencies, dissipation dilution factors and intrinsic loss-limited quality factors of symmetrically-branching out-of-plane...
  • software

    Object Oriented Internet 5.0.2

    SemanticData ModelDesign Export 5.0.2-Alpha This release: API Browser Object Oriented Internet eBook Changes: SemanticData - updated against OPC UA Specification...
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    MitoS segmentation tool (GPU) for Linux

    The MitoS segmentation tool (GPU) is an easy-to-use GUI-based segmentation tool that enables biologists to use the pretrained deep learning model MitoSegNet to segment...
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    kwb.pkgbuild (v0.1.5): R Package for Standardised Development at KWB

    Helper functions for automating R package development at KWB to a predefined style. Documentation website: https://kwb-r.github.io/kwb.pkgbuild/   Changes in v0.1.2:...
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    Aethalometer Data Processor

    Version 20200310   Data acquired from filter-based measurements such as Aethalomenter (AE31/AE30) needs carefully correction due to its inherent systemic error, i.e.,...