95 items found

Licenses: License Not Specified Tags: Biochemistry Marine Biology Groups: Datacite ZENODO Types: software

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  • software

    The Turing Way: A Handbook for Reproducible Data Science

    Reproducible research is necessary to ensure that scientific work can be trusted. Funders and publishers are beginning to require that publications include access to the...
  • software

    OpenMC 0.6.1

    New Features Coarse mesh finite difference (CMFD) acceleration no longer requires PETSc Statepoint file numbering is now zero-padded Python scripts now compatible with...
  • software

    UMCUGenetics/IAP: v2.0.0

    New sge module, containing qsub templates which use the new time and mem variables. New karyotypeplot. Seperate markdup settings from mapping settings. Send done email...
  • software

    Replication files for "It's Raining Men! Hallelujah? The Long-Run Consequence...

    This document presents data and programs used to produce empirical evidence presented in the article and in the Online Appendix. Codes for this paper were run using Stata. The...
  • software

    Shogun: Shogun 4.1.0 - Tajinohi No Agatamori

    This is a new feature and cleanup release. Features: Added GEMPLP for approximate inference to the structured output framework [Jiaolong Xu]. Effeciency improvements of the...
  • software

    Unofficial Geant4 10.04.03 Windows Installer (full functionality) Visual Stud...

    Unofficial Windows installer for Geant4 10.04.03 (see also the official one https://geant4.web.cern.ch/node/1765). It is self-consistent, i.e. it does not require...
  • software

    ReproZip: 1.0.5

    (reprounzip-vagrant didn't change) Bugfixes: Correctly download parameters from server More reliable way of determining X server IP without using /bin/ip Downloads:...
  • software

    MicrostructureNoise.jl

    MicrostructureNoise is a Julia package for Bayesian volatility estimation in presence of market microstructure noise. The estimation methodology is intuitive to understand,...
  • software

    Mochimodel: Mdsplus Tree For Mochilab & Mochi.Labjet

    MochiModel This python script generates a hierarchical MDSplus model tree which interfaces with the Mochi LabJet MochiControl LabVIEW software. MochiControl stores all...
  • software

    UMCUGenetics/IAP: v2.5.0

    New features: IAP modules in own namespace Initial implementation of bcftools roh Sync IAP with Harwtig Pipeline v1.10 and v1.11 Add VT normalize to freebayes analysis...
  • software

    Poliastro: Poliastro 0.5.0 Icatt Edition

    New major release of poliastro, featuring: New algorithm to solve Lambert's problem New documentation Python 3 support only See...
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    ME-ICA/tedana: 0.0.6

    Release Notes We had several major changes this release, including: Changes PCA default component selection to MLE, with previous decision tree accessible through kundu_pca...
  • software

    Smart Citizen Enclosures Archive

    WIP Enclosures for the new Smart Citizen 1.5
  • software

    Inovesa/Inovesa: 2016-11

    This feature level is described in the first paper (see https://arxiv.org/abs/1611.05293). It supports everything needed to do simulations of longitudinal phase space. Change...
  • software

    SI for "A Computational Study of Structural and Excitonic Properties of Chlor...

    files in chapter * are stored in chapter_* folders note for CTubeGen software in chapter_5 folder A software I developed for generating arbitrary chlorosomal tubes,...
  • software

    neurostuff/NiMARE: Initial release

    Release Notes This is NiMARE's initial release. NiMARE is still alpha software, so the package may change dramatically from release to release and there may be bugs in the code....
  • software

    gitter-lab/SINGE: Version 0.2.0

    Version 0.3.0 contains optimizations that greatly increase SINGE's speed but can change its output: Switch to single precision for the kernel matrix Set an upper bound...
  • software

    WrightTools

    One of the larger WrightTools releases: Dropped support for Python 3.5 -- Now 3.6+ only (#798) New method: Moment (see #786): Take the Nth moment of a channel along an axis...
  • software

    Poldracklab/Fmriprep: 1.0.12

    Release Notes A long overdue release. This release integrates the great work of @mgxd to provide results in the CIFTI/grayordinates format for surface-based analyses. It also...
  • software

    MorphoLibJ: MorphoLibJ 1.3.0

    MorphoLibJ libraray v1.3.0. New features: Interactive tool for watershed distance transform (2D/3D) Interactive tool for morphological reconstruction using manual markers...