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Somatypus: A Platypus-based variant calling pipeline for cancer data
baezortega/somatypus: somatypus-1.3 https://github.com/baezortega/somatypus -
vtreat: A Statistically Sound 'data.frame' Processor/Conditioner
A 'data.frame' processor/conditioner that prepares real-world data for predictive modeling in a statistically sound manner. 'vtreat' prepares variables so that... -
glotzerlab/signac
The signac framework helps users manage and scale file-based workflows, facilitating data reuse, sharing, and reproducibility. It provides a simple and robust data model... -
FroehlichKessler2018-SupplementalCodeModelDataResults
Supplemental code, model, data and results to Fröhlich, et al., Cell Systems, 2018, https://doi.org/10.1016/j.cels.2018.10.013. The contained codes are also available at... -
Omics Visualizer
Cytoscape 3 app to import & visualize several data for the same node in a biological network. -
labordynamicsinstitute/ldi-replication-dataprep: LDI Replication Lab Data Pre...
These programs prepare and clean the raw data from the LDI Replication Lab. The output is manually curated on Zenodo, and used for downstream analysis. -
rgeirhos/object-recognition: zenodo-sync-release
First release to enable synchronisation with Zenodo. This repository contains code, data and materials for the paper "Comparing deep neural networks against humans: object... -
ClimModEns v1.0
Set of scripts and data to produce the obejctive anamysis of the climate models ensemble presented in the study "Towards an objective assessment of climate multi-model... -
Data for Selene's quickstart training tutorial
The data for Selene's quickstart training tutorial. Updated from 0.0.0 because the hg19 FASTA file was incorrect (original only contained chr1) -
FUImaging: Neuroimage2014 release v2 - more improvements
This package supplements our recent paper on automatic image segmentation using Non-negative Matrix Factorisation (NMF) [1]. This release adds bugfixes and adapts the regNMF... -
cwi-swat/jsep-sloc-versus-cc: Scripts and Data used for the Empirical analysi...
This archive contains a Rascal-MPL Eclipse project used to parse and calculate the metrics for the Java corpus and analyze the metrics from the Java corpus and the C corpus for... -
Matlab code and simulated data for paper ""Distributed Zeroth Order Optimizat...
This is a Matlab code and simulated matlab data for paper “Distributed Zeroth Order Optimization Over Random Networks: A Kiefer-Wolfowitz Stochastic Approximation... -
mwlodarczak/RespInPeace: Another DOI release
RespInPeace -- Process and analyse breathing belt (RIP) data. -
mbir: Magnitude-Based Inferences
Allows practitioners and researchers a wholesale approach for deriving magnitude-based inferences from raw data. A major goal of mbir is to programmatically detect... -
gitter-lab/SINGE: Version 0.2.0
Version 0.3.0 contains optimizations that greatly increase SINGE's speed but can change its output: Switch to single precision for the kernel matrix Set an upper bound... -
rosalia v0.1.0
Version 0.1.0, as used in my second submission of "Estimating species interactions from observational data with Markov networks" to Ecology. Installation: ... -
Data and outputs for Selene manuscript case 2
Case 2: Developing a new architecture and comparing performance across architectures. chromatin_profiles: ENCODE and Roadmap Epigenomics profiles used in DeepSEA (Zhou &... -
Environmental co-benefits and adverse side-effects of alternative power secto...
This package contains the data and source code used in preparation for the paper "Environmental co-benefits and adverse side-effects of alternative power sector... -
Mntabassm/Saen-Lars: Zenodo
Package Repository | SAEN-LARS Version: 1.0.0 Title: Sequential Adaptive Elastic Net Approach for Single-snapshot Source Localization Short... -
Data and R code used in Delory et al (2019) When history matters: the overloo...
This repository contains the raw data and R code used for the following paper: Delory et al (2019) When history matters: the overlooked role of priority effects on grassland...
