60 items found

Types: software Tags: Plant Biology Cancer

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  • software

    GLAM-Workbench/csv-explorer

    Cultural institutions are making collection data available as machine readable downloads. But how can researchers explore the shape and meaning of this data? How do they know...
  • software

    Ncrncornell/Ced2Arspssreader: 1.3.0

    CED2AR SPSS Reader This project contains java classes that will allow you to read several versions of SPSS data sets. It modifies the code originally written by Pascal Heus...
  • software

    bigSCale2

    Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data.
  • software

    Neural Networks on Random Graphs

    A collection of 1020 neural networks based on random graphs of various types implemented in PyTorch. These networks were used in the paper Romuald A. Janik, Aleksandra Nowak,...
  • software

    Tripal MegaSearch

    Tripal MegaSearch is a tool for downloading biological data stored in a Tripal/Chado database. Site administrators may choose from two different data sources to serve data, i.e....
  • software

    A general proof certification framework for modal logic - Implementation

    This archive contains the lambda-prolog implementation of a general proof certification framework for modal logic
  • software

    CLARIAH/grlc 1.1

    grlc is a lightweight server that takes SPARQL queries curated in GitHub repositories, and translates them to Linked Data Web APIs. This enables universal access to Linked Data....
  • software

    Matlab code and simulated data for paper ""Distributed Zeroth Order Optimizat...

    This is a Matlab code and simulated matlab data for paper “Distributed Zeroth Order Optimization Over Random Networks: A Kiefer-Wolfowitz Stochastic Approximation...
  • software

    Pet Adoption Metadata Analysis

    This is a capstone project intend to use visualization and NLP in order to predict adoption speed by using other variables in the metadata.
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    Script for (single thread) alignment-based MLST analysis

    This script is a modified version of the script implemented by Leighton Pritchard (https://github.com/widdowquinn/scripts/blob/master/bioinformatics/run_...) for the...
  • software

    Global Remittance Flows (2007-2017)

    Data Visualization project presenting trends in global remittance flows. Includes: - trend chart with inflows and outflows from 2007 to 2017 for all countries, in total values...
  • software

    Quantifying the contribution of citizen science to broad-scale ecological dat...

    This is a snapshot of the github repository (https://github.com/cont-limno/CitizenMonitoringLAGOSNE) associated with the publication Poisson et al. (2019). Quantifying the...
  • software

    Data and outputs for Selene manuscript case 2

    Case 2: Developing a new architecture and comparing performance across architectures. chromatin_profiles: ENCODE and Roadmap Epigenomics profiles used in DeepSEA (Zhou &...
  • software

    The CernVM File System: v2.5.1

    The CernVM-File System (CernVM-FS) provides a scalable, reliable and low-maintenance software distribution service. It was developed to assist scientific collaborations to...
  • software

    GNU Astronomy Utilities

    GNU Astronomy Utilities (Gnuastro) is a collection of programs and libraries for astronomical data analysis. Its main tarballs are hosted on gnu.org, but each version is also...
  • software

    Freesasa 2.0

    FreeSASA is an open source library and command line tool to calculate the solvent accessible surface areas of protein molecules. The library is as fast and accurate as existing...
  • software

    Matchtool V1.0.0

    MatchTool is a simple UI for experimenting with the matching functionality of pattern code.   MatchTool can be open from the World Menu > Tools category. The main window...
  • software

    pBroad and gFit -- Pressure Broadening Global Line Fitting Suite

    Hosted at https://gitlab.com/Eiceman/pbroadgfit Originally these two suites of programs were developed for the paper "Re-evaluation of ortho-para-dependence of...
  • software

    Software for paper: Two is better than one: Studying host plant/fungal compat...

    These files represent software I developed as part of the publication: Two is better than one: Studying host plant/fungal compatibility by using a hybrid pathogen. One file is...