175 items found

Types: software Tags: Genetics Microbiology

Filter Results
  • software

    Software used in 'Discontinuous Galerkin discretization for two-equation turb...

    This record collates DOIs for the software components used in 'Discontinuous Galerkin discretization for two-equation turbulence closure model'. The Firedrake components and...
  • software

    Tau Leaping For Molecular Kinetics Of Glycine Clusters On Cu(110)

    Release after production runs for paper.
  • software

    Code for a microRNA Conservation Bioinformatics Collaboration Between the Van...

    This code repository is a part of the the microRNA conservation bioinformatics collaboration between the Van Vactor Lab and Wall Lab, including Elizabeth M. McNeill, Todd F....
  • software

    OpenMC 0.6.1

    New Features Coarse mesh finite difference (CMFD) acceleration no longer requires PETSc Statepoint file numbering is now zero-padded Python scripts now compatible with...
  • software

    of Dynamics of mitochondrial heteroplasmy in three families investigated via ...

    of Dynamics of mitochondrial heteroplasmy in three families investigated via a repeatable re-sequencing study
  • software

    Analysis pipelines included in "Conbase: a software for unsupervised discover...

    This repository contains the analysis pipelines included in "Conbase: a software for unsupervised discovery of clonal somatic mutations in single cells through read...
  • software

    Unofficial Geant4 10.04.03 Windows Installer (full functionality) Visual Stud...

    Unofficial Windows installer for Geant4 10.04.03 (see also the official one https://geant4.web.cern.ch/node/1765). It is self-consistent, i.e. it does not require...
  • software

    Software used in 'Testing'

    This records collates DOIs for the software components used in 'Testing'. The Firedrake components and dependencies used were: COFFEE (A Compiler for Fast Expression...
  • software

    ReproZip: 1.0.5

    (reprounzip-vagrant didn't change) Bugfixes: Correctly download parameters from server More reliable way of determining X server IP without using /bin/ip Downloads:...
  • software

    Ppr User Study Software

    Software developed for the User Study described in:  Daga, Enrico, Mathieu d'Aquin, and Enrico Motta. "Propagating Data Policies: a User...
  • software

    Jstacs/Jstacs: Jstacs release for the ENCODE-DREAM Paper

    Release for documenting the source code accompanying the paper about our method in the ENCODE-DREAM challenge. Sources specific to that project reside in the projects.dream2016...
  • software

    Supplemental Material for Astrophysical Journal paper "Improved Coupling of H...

    A Jupyter notebook containing several derivations of equations in the paper "Improved Coupling of Hydrodynamics and Nuclear Reactions via Spectral Deferred Corrections"
  • software

    Gcube 4.1.1 - The Data Transfer Common Objects V. 2.0.1

    The gCube System - The Data transfer common objects -------------------------------------------------- The Data transfer common objects This software is part of the gCube...
  • software

    bigSCale2

    Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data.
  • software

    Gcube Catalogue-Badge-Portlet Portlet

    accept-invite-portlet manage the sent invitations Support Bugs and support requests can be reported in the gCube issue tracking tool:...
  • software

    gCube storagehub-client-wrapper

    This is a wrapper of storagehub-client library. It allows to interact with storagehub in a simplified way by exposing several utilities. Moreover, It exposes object as defined...
  • software

    Cylineup

    CyLineUp is a Cytoscape plugin that lets you import gene expression data and creates a ‘small multiples’ visualization from it.
  • software

    UMCUGenetics/IAP: v2.5.0

    New features: IAP modules in own namespace Initial implementation of bcftools roh Sync IAP with Harwtig Pipeline v1.10 and v1.11 Add VT normalize to freebayes analysis...
  • software

    Software used in 'Firedrake version for: A Comparison of Second-Order Model O...

    This record collates DOIs for the software components used in 'Firedrake version for: A Comparison of Second-Order Model Order Reduction Methods for an Artificial Fishtail'....
  • software

    Titan Aerosol Models

    Install With pip: $ pip install titan-aerosols Or directly from the source files: $ git clone https://github.com/seignovert/python-titan-aerosols.git $ cd...