579 items found

Types: software Tags: Genetics

Filter Results
  • software

    scikit-tda/kepler-mapper: JOSS Release

    Use sphinx-gallery for documentation examples (#164) Removed mutable arguments (#165) Minor JOSS edits (#166) Allow sparse matrices in map function (PR #163)
  • software

    solver from xuzijian629

    This is the source code of solver, named `solver3` from team xuzijian629 at PACE 2020.
  • software

    Source Code And Data For "A Model Of Bacterial Toxin-Dependent Pathogenesis E...

    This package contains supplementary material and the source code for the simulator used in the manuscript: A model of bacterial toxin-dependent pathogenesis explains infective...
  • software

    Reprozip: 1.0.11

    (reprounzip-docker, reprounzip-vagrant, and reprounzip-vistrails didn't change) Bugfixes: Write timestamp in config with timezone offset Always fix up PATH on MacOS (to...
  • software

    Alevin efficiently estimates accurate gene abundances from dscRNA-seq data

    Source Code for alevin-tool (salmon v0.13.0) used in the manuscript "Alevin efficiently estimates accurate gene abundances from dscRNA-seq data".
  • software

    Ag-Gipp/Citeplag: Initial Release

    Prototype of an external plagiarism detection system that combines the analysis of citations and text in academic documents to improve the identification of disguised forms of...
  • software

    guaix-ucm/megaradrp-calibrations: Release 2017.1

    Calibration files for the MEGARA pipeline
  • software

    gCube 4.2.0 - Google Login Hook v. 1.1.1

    The gCube System - Google Login Hook -------------------------------------------------- The Google hook allows users to login with their Google credentials to a liferay...
  • software

    Living Lab Data Web App 2018

    A web application hosted https://www.cemac.leeds.ac.uk/living-lab/ to retrievable and display air quality data around Leeds University Campus. The source code is open source and...
  • software

    HyperDualMatrixTools.jl: A Julia package to allow factorization and backslash...

    A little Julia module to allow factorization and backslash to work with hyperdual-valued arrays and sparse arrays.
  • software

    ReproZip: 1.0.10

    (reprounzip-vistrails didn't change) Bugfixes: Correctly escape shell commands containing backticks Overwrite tty prompt works correctly on Python 3 Fix /proc in...
  • software

    BART: version 0.2.08

    Changes: new tools: index poly wshfl zexp index: generate indices poly: generate polynomial patterns (Siddharth Iyer) wshfl: wave-shuffling (Siddharth Iyer) zexp: replace...
  • software

    Ga Tool Source Code In Matlab, For Paper: Multi-Objective Regression Test Sel...

    This is the open-source GA tool (written in Matlab), for paper: "Multi-objective regression test selection in practice: an empirical study in the defence software industry"
  • software

    pyGSTio/pyGSTi: Version 0.9.6

    A significant update which shifts pyGSTi's focus to multiple qubits. Previous version, treated 1- and 2-qubit systems as the "normal" case, and n-qubit systems as the "special"...
  • software

    ParseWiki: A python toolbox for parsing Wikipedia articles

    The first official release of the Wikipedia parser which allows the extraction of all Wikipedia articles and revisions in all available languages.
  • software

    Pergola: Boosting Visualization And Analysis Of Longitudinal Data By Unlockin...

    This repository contains the mouse-pergola-reproduce pipeline source code and results produced for the "Pergola: a new paradigm for longitudinal data...
  • software

    Artifact for paper: New Optimizations and Heuristics for Determinization of B...

    The archive artifact.zip contains the artifact for the paper: New Optimizations and Heuristics for Determinization of Büchi Automata It contains:  - the source code...
  • software

    Code For The Analysis Of Acoustic And Micro-Seismic Data Measured At Matterho...

    Python3 code used to produce Figures in the following publication: Weber, S., Faillettaz, J., Meyer, M., Beutel, J., and Vieli, A.: Acoustic and micro-seismic characterization...
  • software

    GAIA-UNIL/G2S: G2S_v0.95

    A flexible MPS framework, including Quantile Sampling (QS) and Narrow Distribution Selection (NDS)