231 items found

Organisations: RISIS2OpenData Tags: 110309 Infectious Diseases Computational Biology Genetics Infectious Diseases Molecular Biology

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  • dataset

    dedup_wf_001--03bbe3d4eb4587078a3a697b4d898888

    Genes with up-regulated expression found in samples derived from cow mammary gland parenchyma infected with coagulase-positive Staphylococci in 3rd or 4th lactations (CoPS-3/4)....
  • dataset

    Additional file 2: of Case report: severe asymptomatic hyponatremia in Prader...

    Time-line summarizing the clinical course of the child described in this case report. (PPTX 76Â kb)
  • dataset

    Additional file 7: of Developing a 670k genotyping array to tag ~2M SNPs acro...

    MNEc2M SNP information. Contains information for SNPs included on the MNEc2M array. Columns include MNEc identifiers, EquCab 2.0 coordinates, and fields indicating if the SNP...
  • dataset

    MOESM2 of Genomic inbreeding coefficients based on the distribution of the le...

    Additional file 2. Inbreeding.example. This file contains a small dataset with information on ROH length for two individuals on chromosome 1. The variables are: nchro: number of...
  • dataset

    Additional file 1: Table S1. of De novo assembly and an...

    List of annotated unigenes and lists of up-regulated genes and down-regulated genes in chilling-treated samples. (XLS 14564 kb).
  • dataset

    Additional file 2: Table S2. of Midgut proteome of an argasid tick, Ornithodo...

    Non-redundant tick proteins identified in the midgut of engorged ticks at 48 h post-feeding (fed group). (XLSX 115 kb)
  • dataset

    Additional file 2: of 3CPET: finding co-factor complexes from ChIA-PET data u...

    Excel file listing the inferred ER-alpha and RNAP-II related networks. (XLSX 35 kb)
  • dataset

    Data normalization considerations for digital tumor dissection

    Abstract In a recently published article in Genome Biology, Li and colleagues introduced TIMER, a gene expression deconvolution approach for studying tumor-infiltrating...
  • dataset

    Additional file 12: of Comparative analyses of glycerotoxin expression unveil...

    Set of primers used to analyze the molecular organization of the GLTx gene. sheet a Primer used to amplify GLTx fragments before cloning into the pGEMÂŽ -T Vector (pGEMÂŽ-T...
  • dataset

    Genome-wide recruitment profiling of transcription factor Crz1 in response to...

    Exposure of the budding Saccharomyces cerevisiae to an alkaline environment produces a robust transcriptional response involving hundreds of genes. Part of this response is...
  • dataset

    Additional file 2: Table S2. of Identification and annotation of conserved pr...

    Table S2A – Locations of FANTOM5 human promoters mapped to the pig genome. Table contains the following columns (left to right): FANTOM5 human promoter ID, Ensembl gene ID...
  • dataset

    MOESM2 of A comprehensive epigenome map of Plasmodium falciparum reveals uniq...

    Additional file 2: Table S5. List of genes and their co-ordinates for each cluster is provided in a separate excel file.
  • dataset

    dedup_wf_001--35aae541e933eb1a588e7fa71e906f1f

    Tables S1 and S2. Gene expression in murine macrophages treated with LPS. Microarray analysis of gene expression in macrophages treated with LPS for 6Â h (Table S1.) and 24Â h...
  • dataset

    Additional file 8: of Transcriptome profiling of Staphylococci-infected cow m...

    Genes with up-regulated expression found in samples derived from cow mammary gland parenchyma infected with coagulase-negative Staphylococci in 3rd or 4th lactations (CoNS-3/4)....
  • dataset

    Additional file 7: of Precise mapping of the transcription start sites of hum...

    List of transcription factors that may regulate the transcription of pri-miRNAs. Using the ChIP-seq data of 161 transcription factors produced by the ENCODE project [21], the...
  • dataset

    Additional file 6: of The psoriasis-associated deletion of late cornified env...

    FIle S2. Input file for generating the World Map. (TXT 1 kb)
  • dataset

    Genes targeted by the Hedgehog-signaling pathway can be regulated by Estrogen...

    Abstract Background Nuclear receptor family member, Estrogen related receptor β, and the Hedgehog signal transduction pathway are both reported to relate to tumorigenesis and...
  • dataset

    dedup_wf_001--586ff74f769f76e381682b1c867b969a

    Heat map of expression profiles of DEGs involved in the photosynthesis. According to their expression pattern under cold stress, the 472 DEGs were categorized in to two groups,...