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Transcriptome profiling in the damselfly Ischnura elegans identifies genes wi...
Abstract Background Sexual dimorphism occurs widely across the animal kingdom and has profound effects on evolutionary trajectories. Here, we investigate sex-specific gene... -
Additional file 11: Tree S2. of Multigene phylogenetic analysis redefines dun...
Scarabaeinae ML tree of dataset G20. (TREE 37 kb) -
dedup_wf_001--4f11f5e19af842218ec324c347846a96
Graphical impressions of representative tag clusters for the various promoter classes. The x-axis represents the genomic position. The corresponding scaffold ID is denoted. The... -
Additional file 1: of Molecular typing of Leptospira interrogans serovar Hard...
Leptospira spp. strains used in MAT and PCR analysis. (XLS 34 kb) -
Acanthamoeba containing endosymbiotic chlamydia isolated from hospital enviro...
Abstract Background Environmental chlamydiae belonging to the Parachlamydiaceae are obligate intracellular bacteria that infect Acanthamoeba, a free-living amoeba, and are a... -
Additional file 4: of Metagenome-assembled genomes uncover a global brackish ...
Phylogenetic tree in Newick format including all complete prokaryotic genomes in NCBI [ 112 ], all approved reconstructed bins (MAGs), and selected single amplified genomes,... -
Additional file 1: of Acanthamoeba containing endosymbi...
Accession numbers of nucleotide sequences used for the phylogenetic analysis. (XLSX 21 kb) -
Additional file 1: Table S1. of Production of hemolysin BL by Bacillus cereus...
List of publicly available closed genomes included in this study. (XLSX 43 kb) -
Additional file 16: Dataset S8. of No evidence for a bovine mastitis Escheric...
This file includes virulence-associated genes with significant Fisherâ s exact test p-values (and Bonferroni correction), which tested the association of VFs with either... -
Additional file 6: of Integrated analyses using RNA-Seq data reveal viral gen...
SNVs of ASGV isolate GD in ASGV-infected sample. (XLSX 17Â kb) -
Additional files 3: Figure S3. of Models of microbiome evolution incorporatin...
Composition of beneficial, commensal, and pathogenic microbes in host population under different selective models. This plot is based on small-scale simulations. Stacked barplot... -
Additional file 8: of Integrated analyses using RNA-Seq data reveal viral gen...
Blast result to identify ASGV-associated contigs from ASGV-infected pear mRNA-Seq data. (XLSX 8Â kb) -
Chromosome diversity and evolution in <i>Allium</i> (Allioideae, Amaryllidaceae)
Despite extensive literature on the diversity of karyotypes in Allium is available, no attempt to analyse these data together, within a robust phylogenetic framework, has been... -
Simulation parameters.
MBR = MPW = MCV = 100, MCA = WBA. n ∈ {3, 9, 27}, WBA ∈ [0.1, 2], WPC ∈ [0, 20], WCT = 0.1. ⌈n/2⌉ groups of size 1 and ⌊n/2⌋ of size chosen uniformly at random from [1, ⌊n/2⌋].... -
Additional file 7: of Integrated analyses using RNA-Seq data reveal viral gen...
Summary of de novo transcriptome assembly from the pear mRNA data. (XLSX 7Â kb) -
New dominant spa type t2741 in livestock-associated MRSA (CC398-MRSA-V) in Fi...
Abstract Background The emergence of livestock-associated MRSA has become a growing public health concern worldwide. Studies elucidating the population structure, as well as... -
Additional file 1: Table S1. of Towards a balanced view of the bacterial tree...
Environmental origin of metagenomic datasets. Shown is the total number of metagenomes for each environment type, the total number of extracted SSU rRNA sequences >â 1200Â... -
Additional file 2: of Evolution of body morphology and beak shape revealed by...
Body measurements. Data for the linear measurements of all specimens involved in this study are shown, including body weight, body length, wing length, tail length, tarsus... -
Additional file 3: File S2. of MicroRNA categorization using sequence motifs ...
Newick formatted phylogenetic tree: This file can be directly uploaded to Itol or other phylogenetic tree viewers for further analysis. (TXT 2Â kb) -
Additional file 3: of Evaluating the role of Pleistocene refugia, rivers and ...
Matrix of DNA distances. (XLS 48 kb)
