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Meeting report: GenBank microbial genomic taxonomy workshop (12â 13 May, 2015)
Abstract Many genomes are incorrectly identified at GenBank. We developed a plan to find and correct misidentified genomes using genomic comparison statistics together with a... -
Additional file 2: of Molecular typing of Leptospira interrogans serovar Hard...
Sequences included in molecular phylogenetic analysis (GenBank access). (XLS 43 kb) -
MOESM6 of Posterior eyespots in larval chitons have a molecular identity simi...
Additional file 6: Figure S4. Shielding pigment test. (A) After treating the specimen with acidified Methanol the eye pigment spot completely fades. (B) After transferring the... -
Additional file 1: Table S1. of Draft genome sequences of eight bacteria isol...
Additional strain information, including growth conditions and genome completeness/contamination. (XLSX 36 kb) -
Additional file 4: of Integrated analyses using RNA-Seq data reveal viral gen...
SNVs of ASGV isolate Fuji in ASGV-infected sample. (XLSX 17Â kb) -
Additional file 2: Table S2. of Production of hemolysin BL by Bacillus cereus...
Virulence-associated genes included in the comparative genomic analysis of Bacillus cereus group isolates. (XLSX 33 kb) -
Additional file 7: Dataset S3. of No evidence for a bovine mastitis Escherich...
This file includes the pathotype-enriched OGs (MAEC or commensal isolates) with a 70% inclusion and 30% exclusion cutoff and their potential association with phylogroup-enriched... -
dedup_wf_001--4f11f5e19af842218ec324c347846a96
Graphical impressions of representative tag clusters for the various promoter classes. The x-axis represents the genomic position. The corresponding scaffold ID is denoted. The... -
Additional file 1: of Molecular typing of Leptospira interrogans serovar Hard...
Leptospira spp. strains used in MAT and PCR analysis. (XLS 34 kb) -
Acanthamoeba containing endosymbiotic chlamydia isolated from hospital enviro...
Abstract Background Environmental chlamydiae belonging to the Parachlamydiaceae are obligate intracellular bacteria that infect Acanthamoeba, a free-living amoeba, and are a... -
Additional file 4: of Metagenome-assembled genomes uncover a global brackish ...
Phylogenetic tree in Newick format including all complete prokaryotic genomes in NCBI [ 112 ], all approved reconstructed bins (MAGs), and selected single amplified genomes,... -
Additional file 1: of Acanthamoeba containing endosymbi...
Accession numbers of nucleotide sequences used for the phylogenetic analysis. (XLSX 21 kb) -
Additional file 1: Table S1. of Production of hemolysin BL by Bacillus cereus...
List of publicly available closed genomes included in this study. (XLSX 43 kb) -
Additional file 6: of Integrated analyses using RNA-Seq data reveal viral gen...
SNVs of ASGV isolate GD in ASGV-infected sample. (XLSX 17Â kb) -
Additional files 3: Figure S3. of Models of microbiome evolution incorporatin...
Composition of beneficial, commensal, and pathogenic microbes in host population under different selective models. This plot is based on small-scale simulations. Stacked barplot... -
Additional file 8: of Integrated analyses using RNA-Seq data reveal viral gen...
Blast result to identify ASGV-associated contigs from ASGV-infected pear mRNA-Seq data. (XLSX 8Â kb) -
Additional file 1: of Maternal care in Acanthosomatinae (Insecta: Heteroptera...
Format: MPEG 4. Title: Egg-smearing behavior of Elasmostethus humeralis. Legend: Female of Elasmostethus humeralis ovipositing on a fruit of the hogweed (Heracleum dulce);... -
Chromosome diversity and evolution in <i>Allium</i> (Allioideae, Amaryllidaceae)
Despite extensive literature on the diversity of karyotypes in Allium is available, no attempt to analyse these data together, within a robust phylogenetic framework, has been... -
Additional file 7: of Nested coevolutionary networks shape the ecological rel...
Complete information for the genera of vertebrates (hosts and/or reservoirs) in the B. burgdorferi epidemiological network. The table includes values of centrality (betweenness... -
Study design.
Study type refers to the type of model and the inclusion of risk heterogeneity in the population modelled. Setting/MoT refers to the geographical setting and the mode of...
