348 items found

Organisations: RISIS2OpenData Groups: Datacite Tags: 110309 Infectious Diseases Computational Biology Genetics Infectious Diseases

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  • dataset

    dedup_wf_001--03bbe3d4eb4587078a3a697b4d898888

    Genes with up-regulated expression found in samples derived from cow mammary gland parenchyma infected with coagulase-positive Staphylococci in 3rd or 4th lactations (CoPS-3/4)....
  • dataset

    Additional file 2: of Case report: severe asymptomatic hyponatremia in Prader...

    Time-line summarizing the clinical course of the child described in this case report. (PPTX 76Â kb)
  • dataset

    Additional file 7: of Developing a 670k genotyping array to tag ~2M SNPs acro...

    MNEc2M SNP information. Contains information for SNPs included on the MNEc2M array. Columns include MNEc identifiers, EquCab 2.0 coordinates, and fields indicating if the SNP...
  • dataset

    MOESM2 of Genomic inbreeding coefficients based on the distribution of the le...

    Additional file 2. Inbreeding.example. This file contains a small dataset with information on ROH length for two individuals on chromosome 1. The variables are: nchro: number of...
  • dataset

    Additional file 1: Table S1. of De novo assembly and an...

    List of annotated unigenes and lists of up-regulated genes and down-regulated genes in chilling-treated samples. (XLS 14564 kb).
  • dataset

    Additional file 2: Table S2. of Midgut proteome of an argasid tick, Ornithodo...

    Non-redundant tick proteins identified in the midgut of engorged ticks at 48 h post-feeding (fed group). (XLSX 115 kb)
  • dataset

    Additional file 2: of 3CPET: finding co-factor complexes from ChIA-PET data u...

    Excel file listing the inferred ER-alpha and RNAP-II related networks. (XLSX 35 kb)
  • dataset

    Additional file 1: Table S1. of Draft genome sequences of eight bacteria isol...

    Additional strain information, including growth conditions and genome completeness/contamination. (XLSX 36 kb)
  • dataset

    Data normalization considerations for digital tumor dissection

    Abstract In a recently published article in Genome Biology, Li and colleagues introduced TIMER, a gene expression deconvolution approach for studying tumor-infiltrating...
  • dataset

    Additional file 12: of Comparative analyses of glycerotoxin expression unveil...

    Set of primers used to analyze the molecular organization of the GLTx gene. sheet a Primer used to amplify GLTx fragments before cloning into the pGEMÂŽ -T Vector (pGEMÂŽ-T...
  • dataset

    Prolyl hydroxylase domain 2 deficiency promotes skeletal muscle fiber-type tr...

    Abstract Background Hypoxia exposure is known to induce an alteration in skeletal muscle fiber-type distribution mediated by hypoxia-inducible factor (HIF)-α. The downstream...
  • dataset

    Additional file 7: of Transcriptome analysis reveals regional and temporal di...

    The temporally DE analysis for the immune-related genes. Sheet 1. Temporally DE immune-related genes list in the jejunum. Sheet 2. KEGG pathway analysis of Temporally DE...
  • dataset

    Genome-wide recruitment profiling of transcription factor Crz1 in response to...

    Exposure of the budding Saccharomyces cerevisiae to an alkaline environment produces a robust transcriptional response involving hundreds of genes. Part of this response is...
  • dataset

    Comparison of monocyte human leukocyte antigen-DR expression and stimulated t...

    Abstract Background Identifying patients in the immunosuppressive phase of sepsis is essential for development of immunomodulatory therapies. Little data exists comparing the...
  • dataset

    Additional file 2: Table S2. of Identification and annotation of conserved pr...

    Table S2A – Locations of FANTOM5 human promoters mapped to the pig genome. Table contains the following columns (left to right): FANTOM5 human promoter ID, Ensembl gene ID...
  • dataset

    MOESM2 of A comprehensive epigenome map of Plasmodium falciparum reveals uniq...

    Additional file 2: Table S5. List of genes and their co-ordinates for each cluster is provided in a separate excel file.
  • dataset

    A deletion in the intergenic region upstream of Ednrb causes head spot in the...

    Abstract Background Head spot is one of the phenotypes identified in the KFRS4/Kyo rat strain. Although previous linkage analysis suggested that Ednrb, which is frequently...
  • dataset

    dedup_wf_001--35aae541e933eb1a588e7fa71e906f1f

    Tables S1 and S2. Gene expression in murine macrophages treated with LPS. Microarray analysis of gene expression in macrophages treated with LPS for 6Â h (Table S1.) and 24Â h...
  • dataset

    Additional file 8: of Transcriptome profiling of Staphylococci-infected cow m...

    Genes with up-regulated expression found in samples derived from cow mammary gland parenchyma infected with coagulase-negative Staphylococci in 3rd or 4th lactations (CoNS-3/4)....