152 items found

Licenses: License Not Specified Types: software Tags: Genetics Microbiology Molecular Biology Organisations: RISIS2OpenData

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  • software

    Software used in 'Discontinuous Galerkin discretization for two-equation turb...

    This record collates DOIs for the software components used in 'Discontinuous Galerkin discretization for two-equation turbulence closure model'. The Firedrake components and...
  • software

    r37980778c78--26564fbc7cdb9e9353abb0a71b54ef0c

    This is the first public release of the ITCell code, and should match that used by the web server at https://salilab.org/itcell/.
  • software

    Code for a microRNA Conservation Bioinformatics Collaboration Between the Van...

    This code repository is a part of the the microRNA conservation bioinformatics collaboration between the Van Vactor Lab and Wall Lab, including Elizabeth M. McNeill, Todd F....
  • software

    r37980778c78--6ef4046a680a2c1048890727a3769f23

    "Blaster" is a Microsoft Windows-based sequence processing and analysis tool that provides simple and intuitive graphical user interface to some of the most common tools for...
  • software

    r37980778c78--83aa8e732e90aa98b59f3765427ce78d

    This project is non-funded and completely voluntary. The main idea behind this is to bridge the gap between the remote sensing technology associated automation and individuals...
  • software

    r37980778c78--c15c97b301c71f2ebcb120863129fe81

    Resource Registry API Documentation Documentation is available on-line in the gCube Wiki:...
  • software

    r37980778c78--fe5d36c92c2c2d92a515c7fd6d37ce55

    gCube Workspace Portlet is a web-gui to manage the gCube workspace a collaborative area where users can exchange and organize information objects (workspace items) according to...
  • software

    Analysis pipelines included in "Conbase: a software for unsupervised discover...

    This repository contains the analysis pipelines included in "Conbase: a software for unsupervised discovery of clonal somatic mutations in single cells through read...
  • software

    r37980778c78--bb3a2b3bc4da8c48124560ee186a9356

    gCube Workspace Explorer Application is an application to navigate the Workspace in read-only mode Documentation Documentation is available on-line in the gCube Wiki:...
  • software

    Supplemental Material for Astrophysical Journal paper "Improved Coupling of H...

    A Jupyter notebook containing several derivations of equations in the paper "Improved Coupling of Hydrodynamics and Nuclear Reactions via Spectral Deferred Corrections"
  • software

    bigSCale2

    Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data.
  • software

    r37980778c78--f8bb2f91182e0918404328a4420b42dd

    The gCube CKAN Data Catalog portlet Documentation Documentation is available on-line in the gCube Wiki: https://wiki.gcube-system.org/gcube/index.php/GCube_Data_Catalogue...
  • software

    Gcube Catalogue-Badge-Portlet Portlet

    accept-invite-portlet manage the sent invitations Support Bugs and support requests can be reported in the gCube issue tracking tool:...
  • software

    gCube storagehub-client-wrapper

    This is a wrapper of storagehub-client library. It allows to interact with storagehub in a simplified way by exposing several utilities. Moreover, It exposes object as defined...
  • software

    wiqr R package: a SPARQL client for Wikidata Query Service

    wiqr is a small R package containing simple SPARQL client for Wikidata Query Service.   Installation You can install the latest development version...
  • software

    r37980778c78--a7007b3b8857f74a7474f892a71f9acf

    This record collates DOIs for the software components used in 'Code generation for generally mapped finite elements'. The Firedrake components and dependencies used were:...
  • software

    r37980778c78--652fad34bb5661efc56ec4b783d35a5d

    This is the first public release of the ITCell code, and should match that used by the web server at https://salilab.org/itcell/.
  • software

    r37980778c78--f12f6ee5b9dfe7396e8498fc5106d62a

    This (in progress) repository includes the code, data, documentation, metadata and figure source files that accompany this research.
  • software

    r37980778c78--f5062bf6ac5079c39371b42fa4dcaf47

    GenerateAG.m is a short MATLAB script that calculates a restricted generalized inverse AG using input data from an atmospheric photochemistry mechanism. The inverse problem...
  • software

    r37980778c78--99fb8ade83011b2e6853edcf9d5dd77d

    KNIME nodes for KripoDB (https://github.com/3D-e-Chem/kripodb). KripoDB is a Python package used to interact with Kripo fragment, fingerprint and similarity data files. KRIPO...