22 items found

Types: software Groups: ZENODO Tags: Cell Biology Evolutionary Biology

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  • software

    Code for a microRNA Conservation Bioinformatics Collaboration Between the Van...

    This code repository is a part of the the microRNA conservation bioinformatics collaboration between the Van Vactor Lab and Wall Lab, including Elizabeth M. McNeill, Todd F....
  • software

    Replication files for "It's Raining Men! Hallelujah? The Long-Run Consequence...

    This document presents data and programs used to produce empirical evidence presented in the article and in the Online Appendix. Codes for this paper were run using Stata. The...
  • software

    The deal.II tutorial step-70: Massively parallel non-matching grid simulation...

    In this tutorial we consider a mixing problem for laminar flows. For rotating impellers, the use of Arbitrary Lagrangian Eulerian formulations (in which the fluid domain is...
  • software

    Qdyn: A Quasi-Dynamic Earthquake Simulator (V1.1)

    Summary QDYN is a boundary element software package to simulate earthquake cycles (tectonic fault slip) under the quasi-dynamic approximation (quasi-static elasticity with...
  • software

    Object Oriented Internet 5.0.2

    SemanticData ModelDesign Export 5.0.2-Alpha This release: API Browser Object Oriented Internet eBook Changes: SemanticData - updated against OPC UA Specification...
  • software

    Software for paper: Two is better than one: Studying host plant/fungal compat...

    These files represent software I developed as part of the publication: Two is better than one: Studying host plant/fungal compatibility by using a hybrid pathogen. One file is...
  • software

    jamesrhester/PyFormatTransformer 0.9

    This software is described in Hester, J.R. (2016) ""A Robust, Format-Agnostic Scientific Data Transfer Framework"  The Data Science Journal 15:12,...
  • software

    Code for "Waves of Maturation and Senescence in Micro-Structural MRI Markers ...

    Code uploaded to support publication in Cerebral Cortex, 2018.
  • software

    Simulink-based dual-band Galileo/GPS simulator (acquisition and tracking)

    The attachment contain a Dual-band Dual-GNSS Simulink-based simulator for the acquisition and tracking of GNSS signals (Galileo E1/E5 and GPS L1/L5). The simulator and its...
  • software

    sebastientourbier/multiscalebrainparcellator v1.1.0-hotfix

    Multi-Scale Brain Parcellator, part of the Connectome Mapping Toolkit (CMTK), is a BIDS App that implements a full anatomical MRI processing pipeline, from raw T1w data to...
  • software

    "Mouse Brain Atlases" Generator Workflows

    Scripts to build the mouse brain atlases collection used by the SAMRI software package and first published in the IRSABI article. The script fetches atlas data from verified...
  • software

    Code for Bayesian linear regression

    Code and derivations for Bayesian linear regression. The derivations are adapted from an online resource   https://www.youtube.com/watch?v=qz2U8coNwV4  ...
  • software

    Edamontology/Edamontology: Edam 1.20

    See the improved changelog-detailed.md for a detailed list of semantic changes in the EDAM ontology. Summary of changes 20 formats added (listed in...
  • software

    ODEEG App Package

    The ODEEG App Package consists of 5 applications: Capacity measurement of 3D models of vessels (Capacity.exe), Inner surface reconstruction of partly 3D scanned vessels...
  • software

    CaFFlow: A Python package for modular, transparent and computationally effici...

    CaFFlow is a Python framework designed for the acquisition and analysis of a variety of image/video streams, including calcium imaging data recorded by small head mounted...
  • software

    TriScale - Source code and related artifacts

    This repository contains artifacts related to TriScale (source code, notebooks, etc.). It is currently anonymous for double-blind review. TriScale: A Framework Supporting...
  • software

    Magnetic tomography reconstruction algorithm

    A gradient-based optimisation routine for the reconstruction of three-dimensional magnetisation structures from a set of single polarisation X-ray projections with...
  • software

    Object-Oriented Internet

    Semantic-Data ModelDesign Export 5.1.0 This release API Browser Object Oriented Internet eBook This update comprises the following changes: Semantic-Data...
  • software

    BART: version 0.2.08

    Changes: new tools: index poly wshfl zexp index: generate indices poly: generate polynomial patterns (Siddharth Iyer) wshfl: wave-shuffling (Siddharth Iyer) zexp: replace...