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dedup_wf_001--5b612c7ec06d2f23fc2e251ff82e0e2a
Assembled 454 transcriptome data, otherwise unpublished. Only sequences used in MBE-published phylogenetic analysis are provided here. Collection information: Trawl Lower Sur... -
Spruce trait data
9 morphometric traits measured for each of the 10 spruce taxa,include:Needle length, Needle width, Cone length, Cone diameter, Seed scale length, Seed scale width,Seed wing... -
Raw 454: Actinoseta_jonesi
Actinoseta jonesi 454 transcriptome data. Full bodies including eyes. Multiple pooled individuals. Raw sequence reads, including adaptors. Adaptor: AAGCAGTGGTATCAACGCAGAGT.... -
Raw 454: Skogsbergia_lerneri_Median_Eyes
Skogsbergia lerneri. 454 transcriptome data. median eyes (more than 50 pooled together). Raw sequence reads, including adaptors. Adaptor: AAGCAGTGGTATCAACGCAGAGT. Collection... -
dedup_wf_001--519d434ff71513918c243934ddfd4894
Alignment and trees associated with empirical results. -
Community_data
The community data files are bat abundance/absence matrices for the family Vespertilionidae and the genus Myotis. Community data for all bat taxa can be found at... -
Stein et al. 2015 Fig. 1 in newick file format
Phylogenetic hypothesis resulting from analysis of the molecular data matrix in the newick file format. -
Data from Benson & Druckenmiller (2013)
Phylogenetic data matrix, R Code for implementing disaprity estimates, and associated documentation. -
dedup_wf_001--b5fd0bff9cdc2761de483d86b2c24242
Landmark data for complete dataset of fixed sand goby specimens -
HawaiianTaro_SNP.fas
ZIP archive of two SNP datasets used for phylogenetic analyses in FASTA format, homozygous positions only (nomenclature see VCF files). -
Raw 454: Vargula_tsujii_Body2
Vargula tsujii 454 transcriptome data. 33 Bodies minus eyes. Two separate runs of 454 from same RNA. Raw sequence reads, including adaptors. Adaptor: AAGCAGTGGTATCAACGCAGAGT.... -
Raw 454: Vargula_tsujii_Body1
Vargula tsujii. 454 transcriptome data. 33 Bodies minus eyes. Two separate runs of 454 from same RNA. Raw sequence reads, including adaptors. Adaptor: AAGCAGTGGTATCAACGCAGAGT.... -
dedup_wf_001--eee27501fa76524dc3bf3af2bae115e0
Metadata for all samples sequenced, including samples excluded from study as described in paper. -
Raw 454: Puriana_sp_Bodies
Puriana sp. 454 transcriptome data. from Bodies minus median eyes. Pooled multiple animals together. Raw sequence reads, including adaptors. Adaptor: AAGCAGTGGTATCAACGCAGAGT.... -
Raw 454: Euphilomedes_morini_Compound_Eyes
Euphilomedes morini. 454 transcriptome data. from compound eyes. Pooled ~50 animals together (100 eyes). Raw sequence reads, including adaptors. Adaptor:... -
BAMM_files
Input and output files of BAMM analyses conducted under six different values for the prior on the expected number of diversification shifts (0.1, 1, 5, 10, 50, 100). (1) Control...
