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SM4 R code and example data
Example code and data for applying temporal banding to a phylogeny and calculating standardised error scores. See manuscript for references to original data sources. -
Trip duration (in hours) for female southern rockhopper penguins during guard...
PIT control: non-handled birds deployed with subcutaneous PITs in previous breeding seasons. Handled control: birds handled but not equipped with any type of device. GPS:... -
Data on use of heat conservation behaviours in birds
File contains raw data used in Pavlovic et al - including use of heat conservation behaviours, and geographical and morphological data across bird species. Sources of data are... -
r37980778c78--f18503e2c170ee448cc46a22c60b7bd2
Foraging parameters of female rockhopper penguins equipped at New Island with GPS data loggers (modelled means ± SE, range, n = number of birds (trips), significant results in... -
species list
This spreadsheets includes the perennial species and annual comparison species. Each crop is one line. The columns include climate, humidity, and cultivation status humidity,... -
dedup_wf_001--fa8e70a3aa518db323210e37fc9c15b7
This R script was tested with R version 3.3.3 on 13 December 2017. It loads the two .csv files also archived with this submission and reproduces the analyses in the paper:... -
H_GRONINGEN - Western marsh harriers (Circus aeruginosus, Accipitridae) breed...
Description H_GRONINGEN - Western marsh harriers (Circus aeruginosus, Accipitridae) breeding in Groningen (the Netherlands) is a bird tracking dataset collected by the Grauwe... -
Supplementary Data 1
Supplementary Data 1. Raw fossil data. Repository and Specimen indicate the collection in which specimen is held and its specimen number. Family, Subfamily, Tribe, Genus, and... -
Supplementary Table 1
Commensal rodent species are key reservoirs for Toxoplasma gondii in the domestic environment. In rodents, different T. gondii strains show variable patterns of virulence... -
dedup_wf_001--e259bf6126b95e34c6f336c3685bae87
This zip file contains MATLAB .m files to do calculations in the tetrahedron (directory TetrahedralCalculations), do the permutation tests (directory (LMP5), read an OceanOptics... -
Processed data and covariates for each bird sister species pair
This file contains all data (variability of body mass across species ranges) and covariates assembled for each tropical-nontropical bird sister species pair identified from a... -
Input Data
Shapefile of weather station data, and database of county climate change perceptions#R_Start: starting year of the record for the station.#R_End: ending year of the record for... -
Model code
The code for the simulation model for which results are presented in the paper. Coding was done in Delphi 7.0. -
Data from: Sound settlement: noise surpasses land cover in explaining breedin...
This file contains all data from the paper "Sound settlement: noise surpasses land cover in explaining breeding habitat selection of secondary cavity nesting birds." Please... -
LaydateYr_23Jan13.txt
Data file for mcmcGLMM in R. Note that slightly different data files were used for different analyses. This file was used for the analyses of laying date change per year in... -
Column metadata for bird sister species data
This is a tab-delimited .txt file with column metadata (description, data source, and units) for each of the columns in the bird_sister_species_data.csv file also archived with... -
Tree29Dec12g.nex
Nexus tree file for mcmcGLMM analyses in R. This tree was used with the data file "LaydateYr_23Jan13.txt" to conduct the analyses shown in Table 4 of the paper. Note that... -
Data files
This project was designed to estimate site occupancy of forest birds in Puerto Rico during a winter before (2015) and after (2018) passage of two significant tropical storms:...
