276 items found

Types: software Tags: Immunology

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  • software

    r37980778c78--98126034b3f07da4ac4b76e920480a7f

    This repository containes singularity containers used to impute 6 months GOSe in the production database of CENTER-TBI.
  • software

    Adversarial Algorithms In Tensorflow

    Bug fix for DeepFool binary classifier case Add batch mode for DeepFool where the algorithm runs until the max epoch is reached. Add batch mode example
  • software

    r37980778c78--fbb7d076fece89df5e745f6cc0e60253

    PyWavelets 1.0.3 is functionally equivalent to the 1.0.2 release. It was made to archive the JOSS paper about PyWavelets to the 1.0.x branch and serve as a reference...
  • software

    labordynamicsinstitute/ldi-replication-dataprep: LDI Replication Lab Data Pre...

    These programs prepare and clean the raw data from the LDI Replication Lab. The output is manually curated on Zenodo, and used for downstream analysis.
  • software

    ReproZip: 1.0.5

    (reprounzip-vagrant didn't change) Bugfixes: Correctly download parameters from server More reliable way of determining X server IP without using /bin/ip Downloads:...
  • software

    DEQ : Equivalence Checker for Deterministic Register Automata

    Archive containing version of tools and benchmarks required to repeat empirical evaluation using the ATVA artifact evaluation virtual machine for the paper DEQ: Equivalence...
  • software

    Ppr User Study Software

    Software developed for the User Study described in:  Daga, Enrico, Mathieu d'Aquin, and Enrico Motta. "Propagating Data Policies: a User...
  • software

    Supplemental Material for Astrophysical Journal paper "Improved Coupling of H...

    A Jupyter notebook containing several derivations of equations in the paper "Improved Coupling of Hydrodynamics and Nuclear Reactions via Spectral Deferred Corrections"
  • software

    r37980778c78--3c3634b6058193dea5dd69a1240a85ac

    The supplementary materials here contain Jupyter notebooks (Python 3) to reproduce figures in the APAP C-like paper (Mao et al. A&A accepted, arXiv:1912.08466). The notebooks...
  • software

    ClimModEns v1.0

    Set of scripts and data to produce the obejctive anamysis of the climate models ensemble presented in the study "Towards an objective assessment of climate multi-model...
  • software

    bigSCale2

    Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data.
  • software

    Modelling of the percolation process

    This application allows modelling percolation lattice in order to approximate the mean number of clusters, implemented with several different algorithms.
  • software

    r37980778c78--e8bc2a667081fcc4737162dad5500745

    reprounzip-vistrails didn't change) Bugfixes: Fixes error using Docker with--enable-x11 on Python 3 Enhancements: docker run gets a --detach command, to keep the...
  • software

    r37980778c78--1e88594c4086dd7e54ff3079b42e6cc2

    Behavior changes: reprounzip will no longer run on Python 2.6 Bugfixes: Fixes file download not using cache if URL is HTTPS Fixes unpacking with directory or chroot for...
  • software

    r37980778c78--a2fc1054489a79693e137eda44d9e12d

    Natural products (NPs), often also referred to as secondary metabolites, are small molecules synthesized by living organisms. Natural products are of interest due to their...
  • software

    RAPID v1.4.0

    General The Routing Application for Parallel computatIon of Discharge (RAPID) is a river network routing model. Given surface and groundwater inflow to rivers, this model can...
  • software

    r37980778c78--8c66a3b29d1bfbf10dfe02cd92f444f5

    This archive contains the Snakemake workflow used to produce the results presented in the Bioconda publication, along with all required input data. See...
  • software

    Datanode Making

    This project includes scripts used in the development of Datanode, an ontology for describing networks of data objects to support deep analysis of the dependencies they have in...
  • software

    Snakemake Workflow Archive: Bioconda Paper

    This archive contains the Snakemake workflow used to produce the results presented in the Bioconda publication, along with all required input data. See...
  • software

    CLARIAH/grlc 1.1

    grlc is a lightweight server that takes SPARQL queries curated in GitHub repositories, and translates them to Linked Data Web APIs. This enables universal access to Linked Data....