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MEC-15-690-Dryad
This zip file extracts data used in Roy et al MEC-15-0690. The ".txt" file is the raw microsatellite scores in number of repeats formatted for the Convert.exe program. The... -
dedup_wf_001--905989f579f0baa9b7c38f16cc2e049f
Data from Table 2. Alpha estimate for three introgressed P. balsamifera regions in P. trichocarpa, one in chromosome (Chr) 06 (region A) and two in chromosome 15 (B and C). -
Sex chromosome analysis
This compressed directory contains the infiles and R script for the analysis to determine if SNPs associated with parallelism between melissa-east and melissa-west populations... -
bgc input file for house sparrow parental population (reference population) w...
input file for house sparrow parental population (reference population) when analysing autosomal loci separately in parental sympatry -
Tajima and Nucleotide Diversity estimates
Data for Figure 2, Figure 4 Supporting Information (Tajimas' D) and Figure 7 Supporting Information (Nucleotide diversity). -
Input files used for STRUCTURE analyses
Input files used for Bayesian analyses of genetic structure implemented in the program STRUCTURE. There is one file for each studied species (Quercus berberidifolia, Quercus... -
bgc input file for parental sympatry test population when analysing autosomal...
bgc input file for parental sympatry test population when analysing autosomal loci separately -
Genotype data
The TalentiEtAl_2017.ped file contains the unphased genotype data for all the 929 animals described in the paper: "Genomic analysis suggests KITLG is responsible for a roan... -
Morphometric data
This table contains morphometric measurements in millimeters of the four focal taxa. Measurements are: length of innermost retrices, wing chord, culmen length, and tarsus... -
BAYPASS data and scripts
This compressed directory contains the infiles, outfiles, and scripts for the BAYPASS analyses used to delineate host-associated SNPs and to test for parallelism. A readme.txt... -
dedup_wf_001--bd9dd05f09daf119be491d8a9e5c2153
These are the specs for performing the hierarchical population structure analyses on the regional groupings. Identical analyses were performed independently for each regional... -
dedup_wf_001--70116ac66febe79c66e6edb0f5d3acb1
Synchronized pileup file created with PoPoolation2 containing the allelic information of all populations used in the analysis of the comparison between Base and generation 15.... -
nacanids_unrel_42Ksnps_CoatColor_wYNP_n33.tped
PLINK formatted genotypes of 33 individuals used for coat color association test, gentoyped at 42K SNPs. This data set includes 10 Yellowstone wolves which were not included in... -
Clonality.Sagittaria.IDclones
Raw clone assignments for fine-scale sampling of 10 monoecious and 11 dioecious populations. The raw data for each population is formatted for GenAlEx; dioecious populations are...
