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data_phenotypes_TarsusDigitRatio
Tarsus length, body size and digit ratio data used for the initial linkage analysis. A detailed description of the file is in the README. -
Handling time, PCR success, Sequence success, and Target sequence success data
Handling time, PCR success, sequence success, and target sequence success for chironomid pupal exuviae samples. -
SNP FST file
This is the pairwise fst output for individual snps. The non-informative sites have been suppressed, so all the rows are the SNPs that meet the coverage criteria. the columns... -
D. melanogaster median Fst and latitude
D. melanogaster Fst values for pair-wise population comparisons and the latitude of each population. The analysis of isolation by distance used the median Fst (median.Fst) and... -
dedup_wf_001--5d1b6ecd655415f557a1258a51fec142
GenBank accession numbers for each submitted sequence -
Tajima and Nucleotide Diversity estimates
Data for Figure 2, Figure 4 Supporting Information (Tajimas' D) and Figure 7 Supporting Information (Nucleotide diversity). -
dedup_wf_001--4d7a5107b259821be8d9b55f0160759a
Steps 1 and 2 are accomplished by running 1_2_create_datasets.sh for the zebra finch dataset. -
Genotype data
The TalentiEtAl_2017.ped file contains the unphased genotype data for all the 929 animals described in the paper: "Genomic analysis suggests KITLG is responsible for a roan... -
dedup_wf_001--b2204c83e40cfff8986df68a48e5dc85
Residual phenotypic data for the totem field (Vancouver) common garden trial. There are about 100 more seedlings in the raw data than the residual data because the residual data... -
population_matrix_CP
A file giving colour pattern groupings for each population for the AMOVA analysis -
dedup_wf_001--b341f5617f163a1085881da29f24b4d6
FASTA file containing 210 resolved alleles from intron 11 of the N-methyl D-aspartate 1 glutamate receptor (GRIN1) gene sampled from 105 Common (Green-winged) Teal (Anas... -
Morphometric data
This table contains morphometric measurements in millimeters of the four focal taxa. Measurements are: length of innermost retrices, wing chord, culmen length, and tarsus... -
Embryo performance across treatments and families
This file contains all the data on embryo performance. This includes survival, time until hatching, bacterial diversities on the eggs, and origin of the embryo (mother and father). -
dedup_wf_001--85408b68721de454024316cbbef69e35
The table contains data on phenotypes for all individuals (IndID). Columns mUVhalf, nmUVmax, nmRedhalf, res358, res570 and res707 show data from spectrometric beak colour... -
Occurrence data.
Number of specimens of each species observed at locality stations TU 1422, 1215, and 1354. Counts include specimens questionably assigned to a given taxon. Total numbers of... -
LDHB.tbs
tbs (to be specified) file defining population-level parameters for simulating neutral genetic diversity in the program MS for LDHB in green-winged teal. MS command line: ./ms...
