-
MEC-15-690-Dryad
This zip file extracts data used in Roy et al MEC-15-0690. The ".txt" file is the raw microsatellite scores in number of repeats formatted for the Convert.exe program. The... -
Structure infile
File contains input data file for Structure analysis. In first column is sample ID (nz=New Zealand, uk=United Kingdom, mc=Macreas flat, t=Twizel, ml=Molesworth, p=Palemrston, A=... -
structure_input
This is a tab-delimited text file containing the nuclear marker genotypes at 9 microsatellite markers and 3 coding genes for 409 Radix snails from the core and extended... -
Migrate - SanPedro
MIGRATE-n file containing the microsatellite data (14 markers) of the freshwater fish Galaxias platei in the San Pedro system in Nothern Patagonia. The parmfile for this run is... -
dedup_wf_001--66817b660c5aafb9d7466e488a12d40f
Includes fasta sequence files, microsatellite genotype files, as well as other input files -
TLR1LB_All_genotypes2015
This is the output file with Phase results for TLR1LB in Berthelot's pipits. This is a fasta file but should be opened using a text editor such as Notepad -
Sampling locations.
*Transect refers to the straight distance along which samples were collected at each site. The three sites for P. jubatus are contained within the Munchique National Park (Fig. 2). -
dedup_wf_001--45964d5c559cf3fccc57c48f7ca7ea85
This file contains shell scripts associated with the ddRAD-Seq portion of this study -
Genotype data
The TalentiEtAl_2017.ped file contains the unphased genotype data for all the 929 animals described in the paper: "Genomic analysis suggests KITLG is responsible for a roan... -
Morphometric data
This table contains morphometric measurements in millimeters of the four focal taxa. Measurements are: length of innermost retrices, wing chord, culmen length, and tarsus... -
Distance_matrices
Standarized distance matrices (Genetic, SST and geographic distance) used for Mantel test, Partial mantel test and MMRR -
TLR3_All_genotypes2015
This is the output file with Phase results for TLR3 in Berthelot's pipits. This is a fasta file but should be opened using a text editor such as Notepad -
Sweden LG2-15 STRUCTURE
Archive file with input files of all 6 populations and a file with the 6 populations pooled together, for Structure v2.3.3 -
Palau_IMa_input_files
Zipped file containing multiple input files used for IMa analyses of the corals from Palau. The name of each file indicates the pair of species being analyzed. -
dS, dN and dN/dS values between Atta cephalotes and Acromyrmex echinatior
Calculated by codeml from one-to-one orthologs (see article methods for details)
