41 items found

Tags: DNA Barcoding Ecology

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  • dataset

    Handling time, PCR success, Sequence success, and Target sequence success data

    Handling time, PCR success, sequence success, and target sequence success for chironomid pupal exuviae samples.
  • dataset

    Algal biomass, bacterial abundance, and bacterial diversity estimates

    These data include mean chlorophyll a (ug/cm2; header - Chlor) and bacterial cell abundance (cells/cm2; header - Bacteria) within each site (1-3) and each time point. Bacterial...
  • dataset

    3P_COI_MSA

    3P_COI_MSA
  • dataset

    barcode_seq

    barcode_seq
  • dataset

    raw data of density survey

    raw data of density survey
  • dataset

    dedup_wf_001--e62c1f5ef685bc48de110bab3a5ecfeb

    Text file showing the filtered data produced by primers ewB/ewC.
  • dataset

    Files associated with the study "Integrating three comprehensive datasets sho...

    The dataset contains the files associated with the study "Integrating three comprehensive datasets shows that mitochondrial DNA variation is linked to species traits and...
  • dataset

    Apiaceae sequences used to evaluate the five DNA barcodes.

    All sequences (3,052 ITS sequences, 3,732 ITS2 sequences, 1,011 psbA-trnH sequences, 567 matK sequences, and 566 rbcL sequences) have been used to evaluate the five DNA barcodes.
  • dataset

    Prey overview images

    Overview photos of prey items collected from army ant raids/emigrations/prey caches collected at La Selva Biological Station, Costa Rica. Folder names give collection event IDs...
  • dataset

    Cynara maximum parsimony tree

    Cynara maximum parsimony tree
  • dataset

    Source modifier table for GenBank-corrected

    Source data for sequences and origin of genomic samples for GenBank accession numbers JN800360-JN800398.
  • dataset

    Image files

    It is a preparation work for cellulose fiber reinforced polymer lamina.
  • dataset

    host_tree_data

    Host tree data files needed for multivariate analyses of endophyte community composition.
  • dataset

    Mantel_test_files

    Data files needed to perform both spatial and phylogenetic Mantel tests.
  • dataset

    NUSants_313bp_COI -- SUPERSEDED - TO BE DELETED AT CURATION

    Fasta of all ant barcodes annotated with species names
  • dataset

    MEC-11-1215_filtered_data_de

    Text file showing the filtered data produced by primers ewD/ewE.
  • dataset

    dedup_wf_001--1a0adab6b7525afbed6715435c5c0950

    A fasta file containing psbA-trnH sequences of 450 angiosperm samples from the Nicaraguan Seasonally Dry Tropical Forest, with taxonomic and geographic information
  • dataset

    4.Lobiger_COI_ distance_matrix

    Matrix of pairwise TrN-corrected COI distances for all Lobiger haplotypes, used as input for ABGD analysis.
  • dataset

    Trace Files

    Trace files of the COI sequences of all the fishes collected from Taal Lake, Philippines
  • dataset

    2_CPR_Final_Data

    Summaries including DNA sequence counts for samples analysed in the paper and the taxa identified using morphology These files are called in the r code (2) below.